RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CLDN16Q9Y5I7 305 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 RGS16O15492 202 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 TYROBPO43914 113 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 PRMT3O60678 531 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 EEDO75530 441 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 SEC24DO94855 1032 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 MLYCDO95822 493 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 PDYNP01213 254 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 ITGA3P26006 1051 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 BSGP35613 385 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 PGDP52209 483 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 RAP1GDS1P52306 607 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 IFT88Q13099 833 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 NSDHLQ15738 373 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 AP5B1Q2VPB7 878 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 SGO1Q5FBB7 561 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 TNFAIP8L3Q5GJ75 292 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 LIPMQ5VYY2 423 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 FRMD7Q6ZUT3 714 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 ASB18Q6ZVZ8 466 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 PTRH1Q86Y79 214 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 SCUBE1Q8IWY4 988 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 MYRIPQ8NFW9 859 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 TCP10LQ8TDR4 215 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 AGAP11Q8TF27 550 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 PTCHD1Q96NR3 888 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 KCNA7Q96RP8 456 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 SMC6Q96SB8 1091 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 HBEGFQ99075 208 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 SMAD5Q99717 465 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 IQCGQ9H095 443 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 ELOVL6Q9H5J4 265 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 ZNF552Q9H707 407 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 LYRM4Q9HD34 91 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 NECTIN3Q9NQS3 549 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 RIC8BQ9NVN3 520 aa17.14■□□□□ 0.33
PDLIM7-216ENST00000506537 MANBAO00462 879 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 ERLIN1O75477 346 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 ZIC2O95409 532 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 PRR35P0CG20 571 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 HTR6P50406 440 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 ARFIP1P53367 373 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 PKNOX1P55347 436 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 SFT2D3Q587I9 215 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 C10orf62Q5T681 223 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 VWA5B1Q5TIE3 1220 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 LRIG3Q6UXM1 1119 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 ADAMTS18Q8TE60 1221 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 SELENOMQ8WWX9 145 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 THOC3Q96J01 351 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 SERPINI1Q99574 410 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 CENPKQ9BS16 269 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 MECRQ9BV79 373 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 SLC29A3Q9BZD2 475 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 TNFRSF12AQ9NP84 129 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 PRDM9Q9NQV7 894 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 SENP1Q9P0U3 644 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 C19orf25Q9UFG5 118 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 MID2Q9UJV3 735 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 SNX6Q9UNH7 406 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 MMACHCQ9Y4U1 282 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 ZNF462Q96JM2 2506 aa17.13■□□□□ 0.33
PDLIM7-216ENST00000506537 A0A0A6YYD5 115 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 TCRBV16S1A1N1A0A5B0 115 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 TMPRSS11DO60235 418 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 SEMA3DO95025 777 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 ESRRBO95718 433 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 ALDH3A1P30838 453 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 TSFMP43897 325 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 FOXA1P55317 472 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 HNRNPH2P55795 449 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 SLAMF1Q13291 335 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 COLEC12Q5KU26 742 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 EXOC3L1Q86VI1 746 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 KBTBD2Q8IY47 623 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 ZCCHC7Q8N3Z6 543 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 TUBB6Q9BUF5 446 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 GATA5Q9BWX5 397 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 MRPL1Q9BYD6 325 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 LHPPQ9H008 270 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 ZBTB20Q9HC78 741 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 MID1IP1Q9NPA3 183 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 PRTFDC1Q9NRG1 225 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 FBXW2Q9UKT8 454 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 STK38LQ9Y2H1 464 aa17.12■□□□□ 0.33
PDLIM7-216ENST00000506537 SERPINA7P05543 415 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 ENO1P06733 434 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 ITGAMP11215 1152 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 CHN1P15882 459 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 ETV4P43268 484 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 HSD17B7P56937 341 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 OR4D2P58180 307 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 MRM1Q6IN84 353 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 PAPD4Q6PIY7 484 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 CLNKQ7Z7G1 428 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 ZNF595Q8IYB9 648 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 METTL6Q8TCB7 284 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 BRIX1Q8TDN6 353 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 PSMF1Q92530 271 aa17.11■□□□□ 0.33
PDLIM7-216ENST00000506537 CENPHQ9H3R5 247 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms