RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CFAP157Q5JU67 520 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 KHDRBS2Q5VWX1 349 aaKnown RBP6.85□□□□□ -1.31
GYPB-206ENST00000506516 FAAH2Q6GMR7 532 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 OR4C11Q6IEV9 310 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 ABHD17CQ6PCB6 329 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 PCSK4Q6UW60 755 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 TMEM205Q6UW68 189 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 KIRREL2Q6UWL6 708 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 ZYG11AQ6WRX3 759 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 NDUFAF7Q7L592 441 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 VN1R5Q7Z5H4 357 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 ZC3H7AQ8IWR0 971 aaKnown RBP6.85□□□□□ -1.31
GYPB-206ENST00000506516 SRRM1Q8IYB3 904 aaKnown RBP6.85□□□□□ -1.31
GYPB-206ENST00000506516 IQCKQ8N0W5 287 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 CA13Q8N1Q1 262 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 GALNT16Q8N428 558 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 CCNYL1Q8N7R7 359 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 BANPQ8N9N5 519 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 PLPP5Q8NEB5 264 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 C7orf57Q8NEG2 295 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 MYRIPQ8NFW9 859 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 OR11G2Q8NGC1 345 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 OR52B6Q8NGF0 335 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 OR5T3Q8NGG3 340 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 C9orf43Q8TAL5 461 aaPredicted RBP6.85□□□□□ -1.31
GYPB-206ENST00000506516 ADAMTS18Q8TE60 1221 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 TRPC4APQ8TEL6 797 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 SREK1Q8WXA9 508 aaKnown RBP6.85□□□□□ -1.31
GYPB-206ENST00000506516 MTFMTQ96DP5 389 aaKnown RBP6.85□□□□□ -1.31
GYPB-206ENST00000506516 L3HYPDHQ96EM0 354 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 APOPT1Q96IL0 206 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 NSUN5Q96P11 429 aaKnown RBP6.85□□□□□ -1.31
GYPB-206ENST00000506516 MTERF1Q99551 399 aaKnown RBP6.85□□□□□ -1.31
GYPB-206ENST00000506516 SERPINI1Q99574 410 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 SLC25A23Q9BV35 468 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 MS4A8Q9BY19 250 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 VN1R1Q9GZP7 353 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 STMN4Q9H169 189 aaPredicted RBP6.85□□□□□ -1.31
GYPB-206ENST00000506516 OR51B5Q9H339 312 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 CENPHQ9H3R5 247 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 ZBTB26Q9HCK0 441 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 PRDM7Q9NQW5 492 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 OXSMQ9NWU1 459 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 MKS1Q9NXB0 559 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 AHSPQ9NZD4 102 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 TRPS1Q9UHF7 1281 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 FBXL4Q9UKA2 621 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 MRPS33Q9Y291 106 aaKnown RBP6.85□□□□□ -1.31
GYPB-206ENST00000506516 PLLPQ9Y342 182 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 PCDHGB7Q9Y5F8 929 aa6.85□□□□□ -1.31
GYPB-206ENST00000506516 PCDHGA9Q9Y5G4 932 aaKnown RBP6.85□□□□□ -1.31
GYPB-206ENST00000506516 LOC102723996A0A087X1L8 192 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 A0A0G2JN53 185 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 BLACEA4D250 179 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 SYNDIG1LA6NDD5 238 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 MAGEB17A8MXT2 336 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 G3V2L1 256 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 CTIFO43310 598 aaKnown RBP6.84□□□□□ -1.31
GYPB-206ENST00000506516 B4GALT2O60909 372 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 DNAJB6O75190 326 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 JRKO75564 520 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 CDC123O75794 336 aaPredicted RBP6.84□□□□□ -1.31
GYPB-206ENST00000506516 DNAJB5O75953 348 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 TBX6O95947 436 aaPredicted RBP6.84□□□□□ -1.31
GYPB-206ENST00000506516 B3GALT4O96024 378 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 KRT6AP02538 564 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 KRT6BP04259 564 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 ALPPP05187 535 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 TSPAN8P19075 237 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 HIST1H1TP22492 207 aaPredicted RBP6.84□□□□□ -1.31
GYPB-206ENST00000506516 ATP5A1P25705 553 aaKnown RBP6.84□□□□□ -1.31
GYPB-206ENST00000506516 ITGA3P26006 1051 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 TLX1P31314 330 aaPredicted RBP6.84□□□□□ -1.31
GYPB-206ENST00000506516 SSR2P43308 183 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 KRT6CP48668 564 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 NEK2P51955 445 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 PGDP52209 483 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 NAGLUP54802 743 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 PKNOX1P55347 436 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 SOX8P57073 446 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 RPS13P62277 151 aaKnown RBP6.84□□□□□ -1.31
GYPB-206ENST00000506516 SNRPNP63162 240 aaKnown RBP6.84□□□□□ -1.31
GYPB-206ENST00000506516 ZNF844Q08AG5 666 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 C19orf57Q0VDD7 668 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 LCP2Q13094 533 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 CHAF1BQ13112 559 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 SLC13A2Q13183 592 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 SLAMF1Q13291 335 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 RUNX2Q13950 521 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 ABRAXAS2Q15018 415 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 LACTB2Q53H82 288 aaPredicted RBP6.84□□□□□ -1.31
GYPB-206ENST00000506516 CEP85LQ5SZL2 805 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 LIPMQ5VYY2 423 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 FRG2Q64ET8 278 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 CPZQ66K79 652 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 ADNP2Q6IQ32 1131 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 TCTN3Q6NUS6 607 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 CYP20A1Q6UW02 462 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 LRIG3Q6UXM1 1119 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 QSOX2Q6ZRP7 698 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms