RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 LRRC32Q14392 662 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 KDM4DQ6B0I6 523 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 BHLHB9Q6PI77 547 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 UBE3DQ7Z6J8 389 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 RNF130Q86XS8 419 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 PIK3C3Q8NEB9 887 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 RASSF5Q8WWW0 418 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 MOAP1Q96BY2 351 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 THAP11Q96EK4 314 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 PDXPQ96GD0 296 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 CNDP2Q96KP4 475 aaKnown RBP16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 XKR8Q9H6D3 395 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 SMURF2Q9HAU4 748 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 SLC6A20Q9NP91 592 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 LYARQ9NX58 379 aaKnown RBP16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 ABCG2Q9UNQ0 655 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 PLEKHM1Q9Y4G2 1056 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 DGKBQ9Y6T7 804 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 LOC100130705A0A1B0GUX0 176 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 TCRBV21S2A2A0A5A6 115 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 C2CD4DB7Z1M9 353 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 CHRM5P08912 532 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 NTSP30990 170 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 BCL6P41182 706 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 RELAQ04206 551 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 REEP3Q6NUK4 255 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 TMEM64Q6YI46 380 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 FAM124AQ86V42 546 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 OFCC1Q8IZS5 231 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 TPD52L3Q96J77 140 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 BMFQ96LC9 184 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 PRDM9Q9NQV7 894 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 KLF15Q9UIH9 416 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 PCDHGA4Q9Y5G9 962 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 TMEM247A6NEH6 219 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 PRAMEF26H0Y7S4 382 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 LCMT2O60294 686 aaKnown RBP16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 F3P13726 295 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 IST1P53990 364 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 ZIK1Q3SY52 487 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 COX20Q5RI15 118 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 ZNF691Q5VV52 312 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 ZNF773Q6PK81 442 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 B3GNT6Q6ZMB0 384 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 GPR141Q7Z602 305 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 VTCN1Q7Z7D3 282 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 SFXN5Q8TD22 340 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 FAM3CQ92520 227 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 DPH7Q9BTV6 452 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 SORBS1Q9BX66 1292 aaKnown RBP16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 CXorf36Q9H7Y0 433 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 TBC1D29Q9UFV1 150 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 TMEFF2Q9UIK5 374 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 TRANK1O15050 2925 aa16.43■□□□□ 0.22
TRAPPC11-204ENST00000505676 OR5K4A6NMS3 321 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 MAN2B1O00754 1011 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 TMPRSS11DO60235 418 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 SEC24DO94855 1032 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 SEMA4FO95754 770 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 GABRG2P18507 467 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 HIST1H1TP22492 207 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 ALDH9A1P49189 494 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 SRP54P61011 504 aaKnown RBP16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 SMAD4Q13485 552 aaKnown RBP16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 ZBED5Q49AG3 693 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 IQCCQ4KMZ1 466 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 MRM1Q6IN84 353 aaKnown RBP16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 ABHD17CQ6PCB6 329 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 SLC30A9Q6PML9 568 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 TMEM92Q6UXU6 159 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 ZNF852Q6ZMS4 543 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 TMEM179BQ7Z7N9 219 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 NFKBIDQ8NI38 313 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 ZNF566Q969W8 418 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 MS4A6EQ96DS6 147 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 MYOCQ99972 504 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 RUBCNLQ9H714 662 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 PAPOLBQ9NRJ5 636 aaKnown RBP16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 SEMA3GQ9NS98 782 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 KIF17Q9P2E2 1029 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 ENOPH1Q9UHY7 261 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 MAP4K5Q9Y4K4 846 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 MAGED1Q9Y5V3 778 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 MYOCOSA0A1B0GUC4 107 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 A6NCN8 305 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 MYO1GB0I1T2 1018 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 C5orf58C9J3I9 102 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 RTCAO00442 366 aaKnown RBP16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 VILLO15195 856 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 ACSL1P33121 698 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 DGKEP52429 567 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 CLDN2P57739 230 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 RGS1Q08116 209 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 ILF3Q12906 894 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 C16orf72Q14CZ0 275 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 BROXQ5VW32 411 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 FAHD1Q6P587 224 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 TMEM145Q8NBT3 493 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 NT5CQ8TCD5 201 aa16.42■□□□□ 0.22
TRAPPC11-204ENST00000505676 FBLIM1Q8WUP2 373 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms