RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 RFC3P40938 356 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 CA7P43166 264 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 MAGEA4P43358 317 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 RAB10P61026 200 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 PPP2R2AP63151 447 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 CALCOCO2Q13137 446 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 E2F2Q14209 437 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 ABHD17CQ6PCB6 329 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 RPTNQ6XPR3 784 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 CCDC25Q86WR0 208 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 RPS19BP1Q86WX3 136 aaKnown RBP12.25□□□□□ -0.45
DDX41-204ENST00000504807 TGIF2LYQ8IUE0 185 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 CTAGE3PQ8IX95 158 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 CENPLQ8N0S6 344 aaPredicted RBP12.25□□□□□ -0.45
DDX41-204ENST00000504807 ARMC10Q8N2F6 343 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 CPSF7Q8N684 471 aaKnown RBP12.25□□□□□ -0.45
DDX41-204ENST00000504807 SLC5A8Q8N695 610 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 SNX31Q8N9S9 440 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 BBOF1Q8ND07 529 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 DNAJB8Q8NHS0 232 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 KCTD4Q8WVF5 259 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 CCT6BQ92526 530 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 NT5DC2Q9H857 520 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 TRIM45Q9H8W5 580 aaPredicted RBP12.25□□□□□ -0.45
DDX41-204ENST00000504807 KCMF1Q9P0J7 381 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 LRFN1Q9P244 771 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 TEKT2Q9UIF3 430 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 ZNF835Q9Y2P0 537 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 CSPG4Q6UVK1 2322 aa12.25□□□□□ -0.45
DDX41-204ENST00000504807 COL6A5A8TX70 2615 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 TRBV11-1A0A0K0K1C0 115 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 PINLYPA6NC86 204 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 NPIPA5E9PKD4 350 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 NME2P1O60361 137 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 CCNT2O60583 730 aaKnown RBP12.24□□□□□ -0.45
DDX41-204ENST00000504807 ZNF354AO60765 605 aaPredicted RBP12.24□□□□□ -0.45
DDX41-204ENST00000504807 CLEC3AO75596 197 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 STK16O75716 305 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 SLC25A12O75746 678 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 CRYABP02511 175 aaKnown RBP12.24□□□□□ -0.45
DDX41-204ENST00000504807 TFEBP19484 476 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 NME2P22392 152 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 SLC12A2P55011 1212 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 LIM2P55344 173 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 RAB38P57729 211 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 ETF1P62495 437 aaKnown RBP12.24□□□□□ -0.45
DDX41-204ENST00000504807 AP2B1P63010 937 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 OC90Q02509 493 aaPredicted RBP12.24□□□□□ -0.45
DDX41-204ENST00000504807 LTBQ06643 244 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 SLMAPQ14BN4 828 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 PDK4Q16654 411 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 XKR6Q5GH73 641 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 SULT1C3Q6IMI6 304 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 SLC25A25Q6KCM7 469 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 Q71RC1 249 aaPredicted RBP12.24□□□□□ -0.45
DDX41-204ENST00000504807 MDGA2Q7Z553 956 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 LGI4Q8N135 537 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 TBC1D19Q8N5T2 526 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 OR2L5Q8NG80 312 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 SUN3Q8TAQ9 357 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 ZNF473Q8WTR7 871 aaKnown RBP12.24□□□□□ -0.45
DDX41-204ENST00000504807 NXNL1Q96CM4 212 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 GPR137Q96N19 417 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 LRRC1Q9BTT6 524 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 CD244Q9BZW8 370 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 REXO4Q9GZR2 422 aaKnown RBP12.24□□□□□ -0.45
DDX41-204ENST00000504807 EHD1Q9H4M9 534 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 PNO1Q9NRX1 252 aaKnown RBP12.24□□□□□ -0.45
DDX41-204ENST00000504807 DEPPQ9NTK1 212 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 GPRC5BQ9NZH0 403 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 CD274Q9NZQ7 290 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 NPIPA1Q9UND3 350 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 PPIEQ9UNP9 301 aaKnown RBP12.24□□□□□ -0.45
DDX41-204ENST00000504807 HRH3Q9Y5N1 445 aa12.24□□□□□ -0.45
DDX41-204ENST00000504807 A0A0G2JMM0 328 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 A0A1W2PPB8 328 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 A0A1W2PRS3 328 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 FAM221AA4D161 298 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 KIR3DP1A8MWS1 328 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 KIAA1324LA8MWY0 1029 aaPredicted RBP12.23□□□□□ -0.45
DDX41-204ENST00000504807 SAP18O00422 153 aaKnown RBP12.23□□□□□ -0.45
DDX41-204ENST00000504807 SLC19A2O60779 497 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 PRKRAO75569 313 aaKnown RBP12.23□□□□□ -0.45
DDX41-204ENST00000504807 EEF1DP29692 281 aaKnown RBP12.23□□□□□ -0.45
DDX41-204ENST00000504807 CASQ1P31415 396 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 TRHRP34981 398 aaPredicted RBP12.23□□□□□ -0.45
DDX41-204ENST00000504807 PTGER1P34995 402 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 ATP6V0D1P61421 351 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 STXBP1P61764 594 aaKnown RBP12.23□□□□□ -0.45
DDX41-204ENST00000504807 ID2Q02363 134 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 CHIT1Q13231 466 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 GRTP1Q5TC63 336 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 DGAT2L6Q6ZPD8 337 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 MAATS1Q7Z4T9 603 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 B3GNT7Q8NFL0 401 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 ADAMTS18Q8TE60 1221 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 PTPMT1Q8WUK0 201 aaPredicted RBP12.23□□□□□ -0.45
DDX41-204ENST00000504807 NCLNQ969V3 563 aa12.23□□□□□ -0.45
DDX41-204ENST00000504807 MTFMTQ96DP5 389 aaKnown RBP12.23□□□□□ -0.45
DDX41-204ENST00000504807 MRRFQ96E11 262 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms