RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 RPS4XP62701 263 aaKnown RBP11.45□□□□□ -0.58
LSM6-204ENST00000504181 RCAN2Q14206 197 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 TMEM249Q2WGJ8 235 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 FAM174BQ3ZCQ3 159 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 SLC22A10Q63ZE4 541 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 OPN5Q6U736 354 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 HSDL2Q6YN16 418 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 ZNF704Q6ZNC4 412 aaPredicted RBP11.45□□□□□ -0.58
LSM6-204ENST00000504181 H2AFVQ71UI9 128 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 FAM136AQ96C01 138 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 TRMT61AQ96FX7 289 aaKnown RBP11.45□□□□□ -0.58
LSM6-204ENST00000504181 MRFAP1L1Q96HT8 127 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 PIGMQ9H3S5 423 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 FAM114A2Q9NRY5 505 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 SH2B3Q9UQQ2 575 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 HYOU1Q9Y4L1 999 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 ALPK2Q86TB3 2170 aa11.45□□□□□ -0.58
LSM6-204ENST00000504181 TGFBR3LH3BV60 316 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 NDUFS4O43181 175 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 CEP104O60308 925 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 AVILO75366 819 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 PSIP1O75475 530 aaKnown RBP11.44□□□□□ -0.58
LSM6-204ENST00000504181 TRAPPC6AO75865 159 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 SMNDC1O75940 238 aaKnown RBP eCLIP11.44□□□□□ -0.58
LSM6-204ENST00000504181 SERPIND1P05546 499 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 RNH1P13489 461 aaKnown RBP11.44□□□□□ -0.58
LSM6-204ENST00000504181 CTNNA2P26232 953 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 CCKARP32238 428 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 HSD17B2P37059 387 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 CDKN1AP38936 164 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 EIF3BP55884 814 aaKnown RBP11.44□□□□□ -0.58
LSM6-204ENST00000504181 UBE2HP62256 183 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 SKP1P63208 163 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 DEFA6Q01524 100 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 BMPR2Q13873 1038 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 VASNQ6EMK4 673 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 CAND1Q86VP6 1230 aaKnown RBP11.44□□□□□ -0.58
LSM6-204ENST00000504181 LRRC56Q8IYG6 542 aaPredicted RBP11.44□□□□□ -0.58
LSM6-204ENST00000504181 ZNF611Q8N823 705 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 SGMS2Q8NHU3 365 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 CTNNBL1Q8WYA6 563 aaPredicted RBP11.44□□□□□ -0.58
LSM6-204ENST00000504181 ZMYND19Q96E35 227 aaPredicted RBP11.44□□□□□ -0.58
LSM6-204ENST00000504181 WDYHV1Q96HA8 205 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 ART5Q96L15 291 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 UGT2B28Q9BY64 529 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 P2RY12Q9H244 342 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 L2HGDHQ9H9P8 463 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 PROK2Q9HC23 129 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 CHMP5Q9NZZ3 219 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 ANAPC5Q9UJX4 755 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 PACSIN3Q9UKS6 424 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 PCDHA13Q9Y5I0 950 aa11.44□□□□□ -0.58
LSM6-204ENST00000504181 hCG_1818297A0A087WSY0 165 aa11.43□□□□□ -0.58
LSM6-204ENST00000504181 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.43□□□□□ -0.58
LSM6-204ENST00000504181 UBFD1O14562 309 aaKnown RBP11.43□□□□□ -0.58
LSM6-204ENST00000504181 HS3ST1O14792 307 aa11.43□□□□□ -0.58
LSM6-204ENST00000504181 STK10O94804 968 aaKnown RBP11.43□□□□□ -0.58
LSM6-204ENST00000504181 CATP04040 527 aaKnown RBP11.43□□□□□ -0.58
LSM6-204ENST00000504181 ZNF16P17020 682 aaPredicted RBP11.43□□□□□ -0.58
LSM6-204ENST00000504181 HRH2P25021 359 aa11.43□□□□□ -0.58
LSM6-204ENST00000504181 MTTPP55157 894 aa11.43□□□□□ -0.58
LSM6-204ENST00000504181 KCNJ11Q14654 390 aa11.43□□□□□ -0.58
LSM6-204ENST00000504181 KLHL38Q2WGJ6 581 aa11.43□□□□□ -0.58
LSM6-204ENST00000504181 LRRC38Q5VT99 294 aa11.43□□□□□ -0.58
LSM6-204ENST00000504181 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.43□□□□□ -0.58
LSM6-204ENST00000504181 ZNF321PQ8N8H1 164 aa11.43□□□□□ -0.58
LSM6-204ENST00000504181 MFSD9Q8NBP5 474 aa11.43□□□□□ -0.58
LSM6-204ENST00000504181 ZFP3Q96NJ6 502 aa11.43□□□□□ -0.58
LSM6-204ENST00000504181 QRFPRQ96P65 431 aa11.43□□□□□ -0.58
LSM6-204ENST00000504181 PPP1R2P1Q96PQ5 205 aa11.43□□□□□ -0.58
LSM6-204ENST00000504181 PANX2Q96RD6 677 aa11.43□□□□□ -0.58
LSM6-204ENST00000504181 C12orf65Q9H3J6 166 aaKnown RBP11.43□□□□□ -0.58
LSM6-204ENST00000504181 ESRP2Q9H6T0 727 aaKnown RBP11.43□□□□□ -0.58
LSM6-204ENST00000504181 ZNHIT6Q9NWK9 470 aaKnown RBP11.43□□□□□ -0.58
LSM6-204ENST00000504181 MARCH4Q9P2E8 410 aaPredicted RBP11.43□□□□□ -0.58
LSM6-204ENST00000504181 MMACHCQ9Y4U1 282 aa11.43□□□□□ -0.58
LSM6-204ENST00000504181 BZW2Q9Y6E2 419 aaKnown RBP11.43□□□□□ -0.58
LSM6-204ENST00000504181 PRKDCP78527 4128 aaKnown RBP11.42□□□□□ -0.58
LSM6-204ENST00000504181 RCBTB2O95199 551 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 ACSL3O95573 720 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 IGHV4-39P01824 125 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 SERPING1P05155 500 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 CYP4B1P13584 511 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 CD79BP40259 229 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 RAB8AP61006 207 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 PRAMEP78395 509 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 MYL5Q02045 173 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 GBX1Q14549 363 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 PHKG1Q16816 387 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 AARS2Q5JTZ9 985 aaKnown RBP11.42□□□□□ -0.58
LSM6-204ENST00000504181 CTSL3PQ5NE16 218 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 DNM1P46Q6ZS02 220 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 C22orf34Q6ZV56 151 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 SPNS2Q8IVW8 549 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 KLHDC8BQ8IXV7 354 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 PPHLN1Q8NEY8 458 aaKnown RBP11.42□□□□□ -0.58
LSM6-204ENST00000504181 PAQR8Q8TEZ7 354 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 GTPBP3Q969Y2 492 aaKnown RBP11.42□□□□□ -0.58
LSM6-204ENST00000504181 C1orf159Q96HA4 380 aa11.42□□□□□ -0.58
LSM6-204ENST00000504181 ZNF778Q96MU6 729 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms