RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 ZNF487B1APH4 448 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 TARM1B6A8C7 271 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 KLRC4-KLRK1H3BQV0 150 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 H7BY64 318 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 H7C0S8 307 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 PJA2O43164 708 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 NDUFS4O43181 175 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 KCNAB3O43448 404 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 NRDCO43847 1150 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 CRLF1O75462 422 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 GPC4O75487 556 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 OR2J2O76002 312 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 NSA2O95478 260 aaKnown RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 METTL18O95568 372 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 CNOT4O95628 575 aaKnown RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 SLC16A8O95907 504 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 SERPINC1P01008 464 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 TUBB4AP04350 444 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 GYPCP04921 128 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 SERPING1P05155 500 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 H2AFZP0C0S5 128 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ZNF888P0CJ79 500 aaPredicted RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 CCL3P10147 92 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 CDH1P12830 882 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 EZRP15311 586 aaKnown RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 TCEA1P23193 301 aaKnown RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 VAMP1P23763 118 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 CTNNA2P26232 953 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 AOAHP28039 575 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 PIGAP37287 484 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 GRIA1P42261 906 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 CPA2P48052 419 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 AGTR2P50052 363 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 SSR4P51571 173 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ZNF136P52737 540 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 PNLIPRP1P54315 467 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 TBPL1P62380 186 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ETF1P62495 437 aaKnown RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 PRAMEP78395 509 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 PTK6Q13882 451 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 VEZF1Q14119 521 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 TFDP2Q14188 446 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 NDUFA9Q16795 377 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ACSF3Q4G176 576 aaPredicted RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 DEFB134Q4QY38 66 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ACSBG2Q5FVE4 666 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 DCST1Q5T197 706 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 WLSQ5T9L3 541 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 SHEQ5VZ18 495 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ZNF425Q6IV72 752 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 TTC23LQ6PF05 361 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 DARS2Q6PI48 645 aaKnown RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 SASS6Q6UVJ0 657 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 CES3Q6UWW8 571 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 FAM47EQ6ZV65 393 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 IL17RELQ6ZVW7 336 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 H2AFVQ71UI9 128 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 OTOAQ7RTW8 1153 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 HDXQ7Z353 690 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ZNF550Q7Z398 422 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 CTAGE6Q86UF2 777 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 CDKL3Q8IVW4 592 aaPredicted RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 RAB42Q8N4Z0 105 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ZNF321PQ8N8H1 164 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 FAM47BQ8NA70 645 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ZFP62Q8NB50 900 aaPredicted RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 POGLUT1Q8NBL1 392 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 C16orf52Q8NHV5 167 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 SLC35G2Q8TBE7 412 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 MAGEC3Q8TD91 643 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ELP5Q8TE02 316 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 CREB3L4Q8TEY5 395 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 STYXQ8WUJ0 223 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ASB15Q8WXK1 588 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 RNASE6Q93091 150 aaKnown RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 NCLNQ969V3 563 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 RAD51AP1Q96B01 352 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 MVB12AQ96EY5 273 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 PIK3IP1Q96FE7 263 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ZC3HAV1LQ96H79 300 aaKnown RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 PTCHD1Q96NR3 888 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 PRAP1Q96NZ9 151 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ALS2CR12Q96Q35 445 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 WDR83Q9BRX9 315 aaKnown RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 DEFB126Q9BYW3 111 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 SPNS1Q9H2V7 528 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ANKHQ9HCJ1 492 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 YAE1D1Q9NRH1 226 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ANO10Q9NW15 660 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 BEX4Q9NWD9 120 aaPredicted RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 HPF1Q9NWY4 346 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 GALNT8Q9NY28 637 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 SPATA7Q9P0W8 599 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 KLHL42Q9P2K6 505 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 UVRAGQ9P2Y5 699 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 INTUQ9ULD6 942 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 CAMK2AQ9UQM7 478 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 PCDHA3Q9Y5H8 950 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 ARHGAP21Q5T5U3 1957 aa3.34□□□□□ -1.87
USP46-205ENST00000504078 TRGV5A0A0B4J1U4 118 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms