RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 ATOH8Q96SQ7 321 aa18.15■□□□□ 0.5
UBE2D3-215ENST00000503418 IGSF5Q9NSI5 407 aa18.15■□□□□ 0.5
UBE2D3-215ENST00000503418 OPTCQ9UBM4 332 aa18.15■□□□□ 0.5
UBE2D3-215ENST00000503418 DAPP1Q9UN19 280 aa18.15■□□□□ 0.5
UBE2D3-215ENST00000503418 MYOCOSA0A1B0GUC4 107 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 PRSS44E7EML9 344 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 K7EPI3 171 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 NME2P1O60361 137 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 IFNA16P05015 189 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 NME2P22392 152 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 HLCSP50747 726 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 IRF9Q00978 393 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 TERF2Q15554 542 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 TBCCQ15814 346 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 UAP1Q16222 522 aaPredicted RBP18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 KRTCAP3Q53RY4 240 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 MROH9Q5TGP6 573 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 CPSF7Q8N684 471 aaKnown RBP18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 KCTD4Q8WVF5 259 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 CCDC77Q9BR77 488 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 LRRC1Q9BTT6 524 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 ADAP2Q9NPF8 381 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 PRDM7Q9NQW5 492 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 ACOT9Q9Y305 439 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 CLDN16Q9Y5I7 305 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 NOTCH2Q04721 2471 aa18.14■□□□□ 0.49
UBE2D3-215ENST00000503418 TEX15Q9BXT5 2789 aa18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 RTCAO00442 366 aaKnown RBP18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 CYR61O00622 381 aa18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 ZNF24P17028 368 aa18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 TRHRP34981 398 aaPredicted RBP18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 GUCY2DQ02846 1103 aa18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 MED27Q6P2C8 311 aa18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 MTFR2Q6P444 385 aa18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 ZNF227Q86WZ6 799 aa18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 TMEM156Q8N614 296 aa18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 SRFBP1Q8NEF9 429 aaKnown RBP18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 ZNF473Q8WTR7 871 aaKnown RBP18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 UBTD2Q8WUN7 234 aa18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 ITLN2Q8WWU7 325 aaPredicted RBP18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 UBE2E3Q969T4 207 aa18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 C16orf45Q96MC5 204 aaPredicted RBP18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 MS4A8Q9BY19 250 aa18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 ROGDIQ9GZN7 287 aa18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 TRIM45Q9H8W5 580 aaPredicted RBP18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 TINAGQ9UJW2 476 aa18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 ZNF223Q9UK11 482 aaPredicted RBP18.13■□□□□ 0.49
UBE2D3-215ENST00000503418 A0A087X1B8 175 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 SYCE1LA8MT33 242 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 ITGA10O75578 1167 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 URI1O94763 535 aaPredicted RBP18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 TGFB1P01137 390 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 C2P06681 752 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 EPB42P16452 691 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 CASP2P42575 452 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 STX4Q12846 297 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 DDX39BQ13838 428 aaKnown RBP18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 ELAVL1Q15717 326 aaKnown RBP18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 C3AR1Q16581 482 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 FAM83EQ2M2I3 478 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 ZNF793Q6ZN11 406 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 UBE3DQ7Z6J8 389 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 MYLK4Q86YV6 388 aaPredicted RBP18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 CENPLQ8N0S6 344 aaPredicted RBP18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 CYP4Z2PQ8N1L4 340 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 ARMC10Q8N2F6 343 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 TMEM132CQ8N3T6 1108 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 TEX9Q8N6V9 391 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 SREK1Q8WXA9 508 aaKnown RBP18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 MAPKAP1Q9BPZ7 522 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 TBCDQ9BTW9 1192 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 LYRM4Q9HD34 91 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 SNX15Q9NRS6 342 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 KLF13Q9Y2Y9 288 aaPredicted RBP18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 ANGPTL3Q9Y5C1 460 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 CLCA3PQ9Y6N3 262 aa18.12■□□□□ 0.49
UBE2D3-215ENST00000503418 CELSR2Q9HCU4 2923 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 ARHGAP10A1A4S6 786 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 SYNDIG1LA6NDD5 238 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 SAP18O00422 153 aaKnown RBP18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 ASNA1O43681 348 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 PRKNO60260 465 aaPredicted RBP18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 CTNSO60931 367 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 LDB3O75112 727 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 ZFAND5O76080 213 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 ESRRAP11474 423 aaPredicted RBP18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 GFAPP14136 432 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 ATP5A1P25705 553 aaKnown RBP18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 PHBP35232 272 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 SSR2P43308 183 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 E2F2Q14209 437 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 AP5B1Q2VPB7 878 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 TMEM35AQ53FP2 167 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 GRHL2Q6ISB3 625 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 CHSY3Q70JA7 882 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 CCDC91Q7Z6B0 441 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 MRGPRGQ86SM5 289 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 SPPL2CQ8IUH8 684 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 SIAH3Q8IW03 269 aa18.11■□□□□ 0.49
UBE2D3-215ENST00000503418 LAS2Q8IYD9 372 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms