RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 IFNAR2P48551 515 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 ATP12AP54707 1039 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR1D5P58170 312 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 FKBP1BP68106 108 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 PRKCEQ02156 737 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 GFPT1Q06210 699 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 SRSF9Q13242 221 aaKnown RBP eCLIP2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 TRA2AQ13595 282 aaKnown RBP eCLIP2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 DUSP5Q16690 384 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 HLA-BQ31612 363 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 CCDC40Q4G0X9 1142 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 AARDQ4LEZ3 155 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 C14orf177Q52M58 125 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 CEP55Q53EZ4 464 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 IFI44LQ53G44 452 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 FASTKD1Q53R41 847 aaKnown RBP2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 ARMCX4Q5H9R4 360 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 LRRC38Q5VT99 294 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 FIP1L1Q6UN15 594 aaKnown RBP2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 MFSD7Q6UXD7 560 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 TOM1L2Q6ZVM7 507 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 COX8CQ7Z4L0 72 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 KRTAP7-1Q8IUC3 87 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 TDHQ8IZJ6 230 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 BATF2Q8N1L9 274 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 SFRP1Q8N474 314 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 OTUD6BQ8N6M0 293 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 SMYD1Q8NB12 490 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 ADAD2Q8NCV1 583 aaKnown RBP2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 NEK11Q8NG66 645 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR2T6Q8NHC8 308 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 URGCPQ8TCY9 931 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 AP2M1Q96CW1 435 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 SNRNP40Q96DI7 357 aaKnown RBP2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 C5orf30Q96GV9 206 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 CDKN2AIPNLQ96HQ2 116 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 ART5Q96L15 291 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 PRMT1Q99873 361 aaKnown RBP2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 SYT15Q9BQS2 421 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF559Q9BR84 538 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 TCHPQ9BT92 498 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 TDRD1Q9BXT4 1180 aaKnown RBP2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 DGCR6LQ9BY27 220 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 TRIM6Q9C030 488 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC39A8Q9C0K1 460 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 RWDD1Q9H446 243 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 DPEP2Q9H4A9 486 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 RNPEPL1Q9HAU8 725 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 SYTL2Q9HCH5 934 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 FANCFQ9NPI8 374 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 EXOC1Q9NV70 894 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 DNAJC11Q9NVH1 559 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 SPG21Q9NZD8 308 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 COX16Q9P0S2 106 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 TMEM181Q9P2C4 612 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 KLHL8Q9P2G9 620 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 POLKQ9UBT6 870 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 TRMT6Q9UJA5 497 aaKnown RBP2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 POMT2Q9UKY4 750 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 CCPG1Q9ULG6 757 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 CLCA3PQ9Y6N3 262 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 PFASO15067 1338 aa2.1□□□□□ -2.07
HMGB1P35-201ENST00000503360 A0A087WZ39 114 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 A0A0A6YYC8 382 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 GLTPD2A6NH11 291 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 ARHGAP42A6NI28 874 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 TMEM110-MUSTN1A8MSY1 372 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 H0YCG3 227 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 H0YIG0 161 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 I3L1I5 382 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 UBXN8O00124 270 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 CACNB4O00305 520 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC1A7O00341 560 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 MLNRO43193 412 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 RIPK2O43353 540 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 AKAP3O75969 853 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZFAND5O76080 213 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 GLCEO94923 617 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 NXPH2O95156 264 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 DUS4LO95620 317 aaKnown RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 MT-ATP6P00846 226 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 IGHEP01854 428 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 TPBGLP0DKB5 382 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 PRG2P13727 222 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 ETS1P14921 441 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 PBLDP30039 288 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 HLA-FP30511 346 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 SRD5A2P31213 254 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 SFNP31947 248 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 MMP12P39900 470 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 TSFMP43897 325 aaKnown RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 TNNT2P45379 298 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR3A3P47888 321 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 SULT1E1P49888 294 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 ARFIP1P53367 373 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 ADARP55265 1226 aaKnown RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 BTG1P62324 171 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 RPP38P78345 283 aaKnown RBP2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 GUCY2DQ02846 1103 aa2.09□□□□□ -2.07
HMGB1P35-201ENST00000503360 ARHGAP1Q07960 439 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms