RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 MRM1Q6IN84 353 aaKnown RBP20.9■□□□□ 0.94
PTPN13-205ENST00000502971 GKN2Q86XP6 184 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 SFTPA2Q8IWL1 248 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 CLEC4FQ8N1N0 589 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 OR8K5Q8NH50 307 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 GAL3ST3Q96A11 431 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 TM4SF19Q96DZ7 209 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 ZNF597Q96LX8 424 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 TRIM4Q9C037 500 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 ARHGEF17Q96PE2 2063 aaPredicted RBP20.9■□□□□ 0.94
PTPN13-205ENST00000502971 C4orf51C9J302 202 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 CLOCKO15516 846 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 DEAF1O75398 565 aaPredicted RBP20.9■□□□□ 0.94
PTPN13-205ENST00000502971 NTRK1P04629 796 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 SLC35G6P0C7Q6 338 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 CKMT2P17540 419 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 MVDP53602 400 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 MANFP55145 182 aaKnown RBP20.9■□□□□ 0.94
PTPN13-205ENST00000502971 VAC14Q08AM6 782 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 MLC1Q15049 377 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.9■□□□□ 0.94
PTPN13-205ENST00000502971 NDUFAF5Q5TEU4 345 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 OOSP2Q86WS3 158 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 ZBED6CLQ96FA7 236 aaPredicted RBP20.9■□□□□ 0.94
PTPN13-205ENST00000502971 PYURFQ96I23 114 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 HSPA12BQ96MM6 686 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 OR2A5Q96R48 311 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 SLC29A1Q99808 456 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 NLNQ9BYT8 704 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 ABCG4Q9H172 646 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 MIR1-1HGQ9H1L0 117 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 NEUROD4Q9HD90 331 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 ACSS1Q9NUB1 689 aaPredicted RBP20.9■□□□□ 0.94
PTPN13-205ENST00000502971 RPS6KA6Q9UK32 745 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 PILRAQ9UKJ1 303 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 ASB4Q9Y574 426 aa20.9■□□□□ 0.94
PTPN13-205ENST00000502971 A0A0J9YY10 115 aa20.89■□□□□ 0.93
PTPN13-205ENST00000502971 SAC3D1A6NKF1 404 aa20.89■□□□□ 0.93
PTPN13-205ENST00000502971 B4DGG1 531 aa20.89■□□□□ 0.93
PTPN13-205ENST00000502971 K7ESF4 209 aa20.89■□□□□ 0.93
PTPN13-205ENST00000502971 SNRNP200O75643 2136 aaKnown RBP20.89■□□□□ 0.93
PTPN13-205ENST00000502971 KDELR2P33947 212 aa20.89■□□□□ 0.93
PTPN13-205ENST00000502971 CHI3L1P36222 383 aaPredicted RBP20.89■□□□□ 0.93
PTPN13-205ENST00000502971 TEAD4Q15561 434 aa20.89■□□□□ 0.93
PTPN13-205ENST00000502971 SPRED1Q7Z699 444 aa20.89■□□□□ 0.93
PTPN13-205ENST00000502971 FAM86B1Q8N7N1 296 aa20.89■□□□□ 0.93
PTPN13-205ENST00000502971 DPH2Q9BQC3 489 aaPredicted RBP20.89■□□□□ 0.93
PTPN13-205ENST00000502971 ROGDIQ9GZN7 287 aa20.89■□□□□ 0.93
PTPN13-205ENST00000502971 LYARQ9NX58 379 aaKnown RBP20.89■□□□□ 0.93
PTPN13-205ENST00000502971 FAF1Q9UNN5 650 aaPredicted RBP20.89■□□□□ 0.93
PTPN13-205ENST00000502971 OR5K3A6NET4 321 aa20.88■□□□□ 0.93
PTPN13-205ENST00000502971 TXNDC9O14530 226 aa20.88■□□□□ 0.93
PTPN13-205ENST00000502971 PRSS23O95084 383 aa20.88■□□□□ 0.93
PTPN13-205ENST00000502971 PCGF2P35227 344 aa20.88■□□□□ 0.93
PTPN13-205ENST00000502971 CRATP43155 626 aa20.88■□□□□ 0.93
PTPN13-205ENST00000502971 RBBP4Q09028 425 aa20.88■□□□□ 0.93
PTPN13-205ENST00000502971 NKG7Q16617 165 aa20.88■□□□□ 0.93
PTPN13-205ENST00000502971 NRF1Q16656 503 aa20.88■□□□□ 0.93
PTPN13-205ENST00000502971 ANGPTL8Q6UXH0 198 aa20.88■□□□□ 0.93
PTPN13-205ENST00000502971 EPHX4Q8IUS5 362 aa20.88■□□□□ 0.93
PTPN13-205ENST00000502971 C11orf65Q8NCR3 313 aa20.88■□□□□ 0.93
PTPN13-205ENST00000502971 C1orf216Q8TAB5 229 aa20.88■□□□□ 0.93
PTPN13-205ENST00000502971 BAHD1Q8TBE0 780 aaPredicted RBP20.88■□□□□ 0.93
PTPN13-205ENST00000502971 EXOSC8Q96B26 276 aaKnown RBP20.88■□□□□ 0.93
PTPN13-205ENST00000502971 SLAMF7Q9NQ25 335 aa20.88■□□□□ 0.93
PTPN13-205ENST00000502971 GPATCH2Q9NW75 528 aa20.88■□□□□ 0.93
PTPN13-205ENST00000502971 URADA6NGE7 173 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 SOCS2O14508 198 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 VILLO15195 856 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 CTSVO60911 334 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 TNFRSF21O75509 655 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 MT-ND1P03886 318 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 HOXA6P31267 233 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 SOAT1P35610 550 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 NXPH1P58417 271 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 RAB8AP61006 207 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.87■□□□□ 0.93
PTPN13-205ENST00000502971 GCNT6Q5T4J0 391 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 ARMC6Q6NXE6 501 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 SDR16C5Q8N3Y7 309 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 CAMKVQ8NCB2 501 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 LMX1AQ8TE12 382 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 GATA6Q92908 595 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 FCRL4Q96PJ5 515 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 ZFYVE21Q9BQ24 234 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 TMEM38AQ9H6F2 299 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 EPS8L2Q9H6S3 715 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 CXorf36Q9H7Y0 433 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 UCK1Q9HA47 277 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 OAZ3Q9UMX2 235 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 DOLKQ9UPQ8 538 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 AP4B1Q9Y6B7 739 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 A0A0J9YVX5 310 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 ACOX3O15254 700 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 NUDT7P0C024 238 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 FASLGP48023 281 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 LRRC23Q53EV4 343 aaPredicted RBP20.87■□□□□ 0.93
PTPN13-205ENST00000502971 MARVELD2Q8N4S9 558 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 CBR4Q8N4T8 237 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 KCT2Q8NC54 265 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms