RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 BARD1Q99728 777 aaKnown RBP11.43□□□□□ -0.58
NUP54-202ENST00000502850 PIP5K1AQ99755 562 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 FUNDC2Q9BWH2 189 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 DGCR6LQ9BY27 220 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 SLC6A16Q9GZN6 736 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 FBRSQ9HAH7 460 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 A4GALTQ9NPC4 353 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 NECTIN3Q9NQS3 549 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 EXD2Q9NVH0 621 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 GPATCH2Q9NW75 528 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 TAAR2Q9P1P5 351 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 STON1Q9Y6Q2 735 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 CKAP5Q14008 2032 aa11.43□□□□□ -0.58
NUP54-202ENST00000502850 NUP214P35658 2090 aaPredicted RBP11.43□□□□□ -0.58
NUP54-202ENST00000502850 A0A1B0GVG6 124 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 SH3PXD2BA1X283 911 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 ANKRD33BA6NCL7 494 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 IGLON5A6NGN9 336 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 PLPP1O14494 284 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 NDUFS4O43181 175 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 CLEC3AO75596 197 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 CLPXO76031 633 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 C1QCP02747 245 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 GBAP04062 536 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 IFNW1P05000 195 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 RHCEP18577 417 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 DRD3P35462 400 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 GGT2P36268 569 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 ANXA11P50995 505 aaKnown RBP11.42□□□□□ -0.58
NUP54-202ENST00000502850 RPP38P78345 283 aaKnown RBP11.42□□□□□ -0.58
NUP54-202ENST00000502850 MC1RQ01726 317 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 EMX1Q04741 257 aaPredicted RBP11.42□□□□□ -0.58
NUP54-202ENST00000502850 MLC1Q15049 377 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 MICAQ29983 383 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 WSCD2Q2TBF2 565 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 TMEM35AQ53FP2 167 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 COX20Q5RI15 118 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 SYT6Q5T7P8 510 aaPredicted RBP11.42□□□□□ -0.58
NUP54-202ENST00000502850 MLIPQ5VWP3 458 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 SAXO2Q658L1 398 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 ZNF776Q68DI1 518 aaPredicted RBP11.42□□□□□ -0.58
NUP54-202ENST00000502850 KIAA1161Q6NSJ0 714 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 VITQ6UXI7 678 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 OR4C15Q8NGM1 316 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 FAR1Q8WVX9 515 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 MYDGFQ969H8 173 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 TAMM41Q96BW9 452 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 NAA50Q9GZZ1 169 aaKnown RBP11.42□□□□□ -0.58
NUP54-202ENST00000502850 LTB4R2Q9NPC1 389 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 ACSS1Q9NUB1 689 aaPredicted RBP11.42□□□□□ -0.58
NUP54-202ENST00000502850 PLCXD1Q9NUJ7 323 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 PAK1IP1Q9NWT1 392 aaPredicted RBP11.42□□□□□ -0.58
NUP54-202ENST00000502850 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.42□□□□□ -0.58
NUP54-202ENST00000502850 TESMINQ9Y4I5 508 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 MAP4K5Q9Y4K4 846 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 MID1O15344 667 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 XPNPEP2O43895 674 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 MPZL2O60487 215 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 GUCY1B2O75343 617 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 GCM2O75603 506 aaPredicted RBP11.42□□□□□ -0.58
NUP54-202ENST00000502850 DRD2P14416 443 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 FMO3P31513 532 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 BSGP35613 385 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 GRK3P35626 688 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 TRIM23P36406 574 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 XCR1P46094 333 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 ENTPD1P49961 510 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 RAB28P51157 221 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 MANFP55145 182 aaKnown RBP11.42□□□□□ -0.58
NUP54-202ENST00000502850 RPS21P63220 83 aaKnown RBP11.42□□□□□ -0.58
NUP54-202ENST00000502850 OCA2Q04671 838 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 LAPTM4AQ15012 233 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 MPEG1Q2M385 716 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 EGFLAMQ63HQ2 1017 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 ZNF852Q6ZMS4 543 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 LGI4Q8N135 537 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 PARP8Q8N3A8 854 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 ZNF740Q8NDX6 193 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 DENND6BQ8NEG7 585 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 B4GALNT2Q8NHY0 566 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 FAM81AQ8TBF8 368 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 FNDC8Q8TC99 324 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 FKBP10Q96AY3 582 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 PDXPQ96GD0 296 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 NECAB3Q96P71 396 aaPredicted RBP11.42□□□□□ -0.58
NUP54-202ENST00000502850 FAIM2Q9BWQ8 316 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 MVB12BQ9H7P6 319 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 EHD3Q9NZN3 535 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 ACSL6Q9UKU0 697 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 PLAGL1Q9UM63 463 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 PCDHGA10Q9Y5H3 936 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 ENPP4Q9Y6X5 453 aa11.42□□□□□ -0.58
NUP54-202ENST00000502850 VCANP13611 3396 aa11.41□□□□□ -0.58
NUP54-202ENST00000502850 TMEM229AB2RXF0 380 aa11.41□□□□□ -0.58
NUP54-202ENST00000502850 SH3BP5O60239 455 aa11.41□□□□□ -0.58
NUP54-202ENST00000502850 KLHL18O94889 574 aa11.41□□□□□ -0.58
NUP54-202ENST00000502850 CCNB2O95067 398 aa11.41□□□□□ -0.58
NUP54-202ENST00000502850 HTR1BP28222 390 aa11.41□□□□□ -0.58
NUP54-202ENST00000502850 FRKP42685 505 aaPredicted RBP11.41□□□□□ -0.58
NUP54-202ENST00000502850 STT3AP46977 705 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms