RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 MARCH2Q9P0N8 246 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 SRPK3Q9UPE1 567 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 RUVBL2Q9Y230 463 aaKnown RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 PKP3Q9Y446 797 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 LYVE1Q9Y5Y7 322 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 A0A0A0MRY4 1105 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 MTMR11A4FU01 709 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 TRABD2BA6NFA1 517 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 CBX4O00257 560 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 BTN3A1O00481 513 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 E2F3O00716 465 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 SGCEO43556 437 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 PIAS2O75928 621 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 ADH7P40394 386 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 PREPP48147 710 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 CAV3P56539 151 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 SCAND1P57086 179 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 DEFA1P59665 94 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 DEFA3P59666 94 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 MEF2AQ02078 507 aaPredicted RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 STX5Q13190 355 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 GRK1Q15835 563 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 GTDC1Q4AE62 458 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 XKR4Q5GH76 650 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 SPANXN2Q5MJ10 180 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 PIK3R6Q5UE93 754 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 LHX8Q68G74 356 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 SCIMPQ6UWF3 145 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 UNQ6494/PRO21346Q6UXR6 183 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 NPWQ8N729 165 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 CHST14Q8NCH0 376 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 OR11H7Q8NGC8 314 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 LINC01599Q8WXQ3 324 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 SPATA13Q96N96 652 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 OR5M11Q96RB7 305 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 RERGLQ9H628 205 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 ABCC13Q9NSE7 274 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 SDHAF2Q9NX18 166 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 NSMCE4AQ9NXX6 385 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 TRPM5Q9NZQ8 1165 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 FBXW11Q9UKB1 542 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 NDRG2Q9UN36 371 aaKnown RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 GRIP1Q9Y3R0 1128 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 TET1Q8NFU7 2136 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 SPTBN5Q9NRC6 3674 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 A0A1W2PRU2 124 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 PGPEP1LA6NFU8 196 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 UPK3BL1B0FP48 263 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 UPK3BL2E5RIL1 263 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 CCL22O00626 93 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 NPC1O15118 1278 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 ARHGEF9O43307 516 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 EIF1BO60739 113 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 UGT2B17O75795 530 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 MED26O95402 600 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 RAF1P04049 648 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 HBQ1P09105 142 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 SLC35E2BP0CK96 405 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 PTPN7P35236 360 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 EIF1P41567 113 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 MAGEA12P43365 314 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 HOXA1P49639 335 aaPredicted RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 UGT2B15P54855 530 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 GABARAPL2P60520 117 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 DSC2Q02487 901 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 UGT8Q16880 541 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 C5orf46Q6UWT4 87 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 LINC00299Q6ZSB3 139 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 SYVN1Q86TM6 617 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 CPOQ8IVL8 374 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 OR2C3Q8N628 320 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 SMG7Q92540 1137 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 BADQ92934 168 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 PPP1R14AQ96A00 147 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 SGK3Q96BR1 496 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 CCM2Q9BSQ5 444 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 FICDQ9BVA6 458 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 ACPTQ9BZG2 426 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 MIXL1Q9H2W2 232 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 IKZF5Q9H5V7 419 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 AKTIPQ9H8T0 292 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 B3GAT2Q9NPZ5 323 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 RGS18Q9NS28 235 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 GKN1Q9NS71 199 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 ACTR10Q9NZ32 417 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 A0A087WV62 115 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 H7C0S8 307 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 BCKDKO14874 412 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 ADAM12O43184 909 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 WDR47O94967 919 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 MPOP05164 745 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 NDUFB7P17568 137 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 F8A1P23610 371 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 PTX3P26022 381 aaPredicted RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 APEX1P27695 318 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 ATP5C1P36542 298 aaKnown RBP5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 RABIFP47224 123 aa5.54□□□□□ -1.52
SOX2-OT-218ENST00000498731 SERPINB9P50453 376 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms