RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 SMIM10L1P0DMW3 83 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 GABRA1P14867 456 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 SAT1P21673 171 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 BTN3A2P78410 334 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 SLC10A1Q14973 349 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 RBBP5Q15291 538 aaKnown RBP12.91□□□□□ -0.34
CCDC58-207ENST00000498466 TOR1AIP1Q5JTV8 583 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 PAQR3Q6TCH7 311 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 HSDL2Q6YN16 418 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 RTL4Q6ZR62 310 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 SCUBE1Q8IWY4 988 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 LMNTD2Q8IXW0 634 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 FAM222BQ8WU58 562 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 LINGO1Q96FE5 620 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 LRRC46Q96FV0 321 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 SMIM10Q96HG1 83 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 FAR2Q96K12 515 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 BAG1Q99933 345 aaPredicted RBP12.91□□□□□ -0.34
CCDC58-207ENST00000498466 ADAP2Q9NPF8 381 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 TAS2R13Q9NYV9 303 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 AKAP6Q13023 2319 aa12.91□□□□□ -0.34
CCDC58-207ENST00000498466 TRGV5A0A0B4J1U4 118 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 C4orf51C9J302 202 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 TGFBR3LH3BV60 316 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 CLDN4O14493 209 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 ATE1O95260 518 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 GUCA1CO95843 209 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 P04436 131 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 IFNA16P05015 189 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 INHBBP09529 407 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 DNASE1L1P49184 302 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 AP1S2P56377 157 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 HSD17B7P56937 341 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 REEP5Q00765 189 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 GPS1Q13098 491 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 HSP90AA5PQ58FG0 334 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 ANKRD22Q5VYY1 191 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 TMEM198Q66K66 360 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 CLEC9AQ6UXN8 241 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 TMPRSS11BQ86T26 416 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 TMEM132CQ8N3T6 1108 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 RNF10Q8N5U6 811 aaKnown RBP12.9□□□□□ -0.34
CCDC58-207ENST00000498466 ATL1Q8WXF7 558 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 SCYL1Q96KG9 808 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 AIF1LQ9BQI0 150 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 TRIM54Q9BYV2 358 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 IARS2Q9NSE4 1012 aaKnown RBP12.9□□□□□ -0.34
CCDC58-207ENST00000498466 SACM1LQ9NTJ5 587 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 ZKSCAN5Q9Y2L8 839 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 DYRK1BQ9Y463 629 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 MAD1L1Q9Y6D9 718 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 CLCA3PQ9Y6N3 262 aa12.9□□□□□ -0.34
CCDC58-207ENST00000498466 ZNF407Q9C0G0 2248 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 A0A0G2JN53 185 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 HSPB2A8KAH6 182 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 GOLGA8MH3BSY2 632 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 DVL2O14641 736 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 NRDCO43847 1150 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 HCN1O60741 890 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 SERPINA6P08185 405 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 BMP5P22003 454 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 TACR1P25103 407 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 ASCL1P50553 236 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 HNRNPFP52597 415 aaKnown RBP12.89□□□□□ -0.35
CCDC58-207ENST00000498466 HK2P52789 917 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 STXBP1P61764 594 aaKnown RBP12.89□□□□□ -0.35
CCDC58-207ENST00000498466 CCZ1BP86790 482 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 CCZ1P86791 482 aaPredicted RBP12.89□□□□□ -0.35
CCDC58-207ENST00000498466 TIAL1Q01085 375 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCDC58-207ENST00000498466 FOXO1Q12778 655 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 RUNX2Q13950 521 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 ELAVL1Q15717 326 aaKnown RBP12.89□□□□□ -0.35
CCDC58-207ENST00000498466 HSPB2Q16082 182 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 BBS9Q3SYG4 887 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 CLNKQ7Z7G1 428 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 FAM47BQ8NA70 645 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 GOLM1Q8NBJ4 401 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 RELL2Q8NC24 303 aaPredicted RBP12.89□□□□□ -0.35
CCDC58-207ENST00000498466 TMEM52Q8NDY8 209 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 MAIP1Q8WWC4 291 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 RNASE6Q93091 150 aaKnown RBP12.89□□□□□ -0.35
CCDC58-207ENST00000498466 FBXL8Q96CD0 374 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 SGCZQ96LD1 299 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 FAM167BQ9BTA0 163 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 PELI2Q9HAT8 420 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 TUBA8Q9NY65 449 aaPredicted RBP12.89□□□□□ -0.35
CCDC58-207ENST00000498466 SPRR3Q9UBC9 169 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 MRPS33Q9Y291 106 aaKnown RBP12.89□□□□□ -0.35
CCDC58-207ENST00000498466 CLDN16Q9Y5I7 305 aa12.89□□□□□ -0.35
CCDC58-207ENST00000498466 FGGP02679 453 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 CCL3P10147 92 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 MLNP12872 115 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 ENDOUP21128 410 aaKnown RBP12.88□□□□□ -0.35
CCDC58-207ENST00000498466 HOXC12P31275 282 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 MAGEA6P43360 314 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 CDKN2DP55273 166 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 RAB38P57729 211 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 IL2P60568 153 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 DAZAP2Q15038 168 aaPredicted RBP12.88□□□□□ -0.35
CCDC58-207ENST00000498466 HYAL4Q2M3T9 481 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms