RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 ZNF319Q9P2F9 582 aa3.24□□□□□ -1.89
CALD1-224ENST00000498254 IL20RAQ9UHF4 553 aa3.24□□□□□ -1.89
CALD1-224ENST00000498254 ATP6V0A2Q9Y487 856 aa3.24□□□□□ -1.89
CALD1-224ENST00000498254 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 A0A0G2JLW4 131 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 ATP6AP2A0A1C7CYW4 349 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 SH3PXD2BA1X283 911 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 ERICH4A6NGS2 130 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 SRRM4A7MD48 611 aaKnown RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 SMIM1B2RUZ4 78 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 P2RY10O00398 339 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 PES1O00541 588 aaKnown RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 NDC80O14777 642 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 SIGLEC5O15389 551 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 LMX1BO60663 402 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 NOL3O60936 208 aaKnown RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 PEX11AO75192 247 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 HMMRO75330 724 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 SYNGR4O95473 234 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 AK1P00568 194 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 PRSS1P07477 247 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 HMBSP08397 361 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 CD48P09326 243 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 CEACAM1P13688 526 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 GPX3P22352 226 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 HLA-FP30511 346 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 SOX3P41225 446 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 TNFRSF4P43489 277 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 TRPC1P48995 793 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 CCL11P51671 97 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 KCNJ10P78508 379 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 ILF3Q12906 894 aaKnown RBP eCLIP3.23□□□□□ -1.89
CALD1-224ENST00000498254 HNRNPDQ14103 355 aaKnown RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 GRB14Q14449 540 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 SCN5AQ14524 2016 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 TRADDQ15628 312 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 KIAA1644Q3SXP7 199 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 ZNF718Q3SXZ3 478 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 PDLIM3Q53GG5 364 aaPredicted RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 FAM76BQ5HYJ3 339 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 ATP1A1-AS1Q5TC04 95 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 LIPKQ5VXJ0 399 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 NKAIN2Q5VXU1 208 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 RTL6Q6ICC9 239 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 TCEAL6Q6IPX3 200 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 C19orf48Q6RUI8 117 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 LEKR1Q6ZMV7 388 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 MEX3BQ6ZN04 569 aaKnown RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 RFPL4BQ6ZWI9 263 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 MCM10Q7L590 875 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 ERASQ7Z444 233 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 PTAR1Q7Z6K3 402 aaPredicted RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 SYVN1Q86TM6 617 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 WDR49Q8IV35 697 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 ELMOD1Q8N336 334 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 FAM89BQ8N5H3 189 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 CCDC185Q8N715 623 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 RELL2Q8NC24 303 aaPredicted RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 ZNF540Q8NDQ6 660 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 IPMKQ8NFU5 416 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 GANCQ8TET4 914 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 GIMAP5Q96F15 307 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 PCED1BQ96HM7 432 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 RPGRIP1Q96KN7 1286 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 GPR137Q96N19 417 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 ERGIC2Q96RQ1 377 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 EPYCQ99645 322 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 IL12RB2Q99665 862 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 MEIS3Q99687 375 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 NKX3-1Q99801 234 aaPredicted RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 SSX3Q99909 188 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 JPH2Q9BR39 696 aaPredicted RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 CCSER1Q9C0I3 900 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 COQ10BQ9H8M1 238 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 ACTR8Q9H981 624 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 ROPN1Q9HAT0 212 aaPredicted RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 ZNF334Q9HCZ1 680 aaPredicted RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 PALMDQ9NP74 551 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 POLE3Q9NRF9 147 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 YAE1D1Q9NRH1 226 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 MAN2C1Q9NTJ4 1040 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 ACOXLQ9NUZ1 547 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 CNOT2Q9NZN8 540 aaKnown RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 ZNF624Q9P2J8 865 aaPredicted RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 ANKMY1Q9P2S6 941 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 TBK1Q9UHD2 729 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 TEKT2Q9UIF3 430 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 ELF5Q9UKW6 265 aaPredicted RBP3.23□□□□□ -1.89
CALD1-224ENST00000498254 ENTPD4Q9Y227 616 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 ANGPTL3Q9Y5C1 460 aa3.23□□□□□ -1.89
CALD1-224ENST00000498254 NEDD4P46934 1319 aa3.22□□□□□ -1.89
CALD1-224ENST00000498254 CENPJQ9HC77 1338 aaPredicted RBP3.22□□□□□ -1.89
CALD1-224ENST00000498254 A0A1W2PR80 420 aa3.22□□□□□ -1.89
CALD1-224ENST00000498254 ANHXE9PGG2 379 aa3.22□□□□□ -1.89
CALD1-224ENST00000498254 SLC1A7O00341 560 aa3.22□□□□□ -1.89
CALD1-224ENST00000498254 MPHOSPH10O00566 681 aaKnown RBP3.22□□□□□ -1.89
CALD1-224ENST00000498254 KLF11O14901 512 aa3.22□□□□□ -1.89
CALD1-224ENST00000498254 INSIG1O15503 277 aa3.22□□□□□ -1.89
CALD1-224ENST00000498254 CLPTM1O96005 669 aa3.22□□□□□ -1.89
CALD1-224ENST00000498254 F7P08709 466 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms