RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ATP5F1P24539 256 aaPredicted RBP14.4□□□□□ -0.1
NUP50-219ENST00000497960 HNRNPH1P31943 449 aaKnown RBP14.4□□□□□ -0.1
NUP50-219ENST00000497960 PLA2G16P53816 162 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 TAS2R50P59544 299 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 ZNF33BQ06732 778 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 ELOAQ14241 798 aaKnown RBP14.4□□□□□ -0.1
NUP50-219ENST00000497960 NR6A1Q15406 480 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 TNFAIP8L3Q5GJ75 292 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 AGBL2Q5U5Z8 902 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 PRAMEF9Q5VWM5 478 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 CLEC18BQ6UXF7 455 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 ZYG11AQ6WRX3 759 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 SLC22A9Q8IVM8 553 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 CA13Q8N1Q1 262 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 CLEC18CQ8NCF0 446 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 OR2L5Q8NG80 312 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 SUN3Q8TAQ9 357 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 RDH11Q8TC12 318 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 ZNF354BQ96LW1 612 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 FAM111AQ96PZ2 611 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 NPLQ9BXD5 320 aaPredicted RBP14.4□□□□□ -0.1
NUP50-219ENST00000497960 AICDAQ9GZX7 198 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 RNF32Q9H0A6 362 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 COPS7BQ9H9Q2 264 aaPredicted RBP14.4□□□□□ -0.1
NUP50-219ENST00000497960 MMP25Q9NPA2 562 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 PRDM9Q9NQV7 894 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 SLC17A7Q9P2U7 560 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 ZNF490Q9ULM2 529 aaPredicted RBP14.4□□□□□ -0.1
NUP50-219ENST00000497960 PLLPQ9Y342 182 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 SPTBN1Q01082 2364 aaKnown RBP14.39□□□□□ -0.11
NUP50-219ENST00000497960 FLNCQ14315 2725 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 POLEQ07864 2286 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 A0A0G2JN53 185 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 LRRC14BA6NHZ5 514 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 C4orf51C9J302 202 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 FAM227AF5H4B4 570 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 SASH3O75995 380 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 AGFG2O95081 481 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 SIX3O95343 332 aaPredicted RBP14.39□□□□□ -0.11
NUP50-219ENST00000497960 EPB42P16452 691 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 EPORP19235 508 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 CD22P20273 847 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 ARL1P40616 181 aaPredicted RBP14.39□□□□□ -0.11
NUP50-219ENST00000497960 CASP2P42575 452 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 PIK3CGP48736 1102 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 TNFSF10P50591 281 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 MAGOHP61326 146 aaKnown RBP14.39□□□□□ -0.11
NUP50-219ENST00000497960 BTG2P78543 158 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 MRPL49Q13405 166 aaKnown RBP14.39□□□□□ -0.11
NUP50-219ENST00000497960 RCN2Q14257 317 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 PCBP2Q15366 365 aaKnown RBP eCLIP14.39□□□□□ -0.11
NUP50-219ENST00000497960 ADPRMQ3LIE5 342 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 RPUSD3Q6P087 351 aaKnown RBP14.39□□□□□ -0.11
NUP50-219ENST00000497960 MED27Q6P2C8 311 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 FAM180AQ6UWF9 173 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 SLC5A8Q8N695 610 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 TEX9Q8N6V9 391 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 SRFBP1Q8NEF9 429 aaKnown RBP14.39□□□□□ -0.11
NUP50-219ENST00000497960 TCP10LQ8TDR4 215 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 ADAMTS18Q8TE60 1221 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 CCDC126Q96EE4 140 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 TMEM237Q96Q45 408 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 BARD1Q99728 777 aaKnown RBP14.39□□□□□ -0.11
NUP50-219ENST00000497960 SSU72Q9NP77 194 aaKnown RBP14.39□□□□□ -0.11
NUP50-219ENST00000497960 KCNK9Q9NPC2 374 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 ABI3Q9P2A4 366 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 MMACHCQ9Y4U1 282 aa14.39□□□□□ -0.11
NUP50-219ENST00000497960 PRRC2CQ9Y520 2896 aaKnown RBP14.39□□□□□ -0.11
NUP50-219ENST00000497960 OR5H15A6NDH6 313 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 ANKUB1A6NFN9 424 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 CLDN4O14493 209 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 TYROBPO43914 113 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 DLX3O60479 287 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 CBX6O95503 412 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 F10P00742 488 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 RPS17P08708 135 aaKnown RBP14.38□□□□□ -0.11
NUP50-219ENST00000497960 PCNAP12004 261 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 MAOAP21397 527 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 SERPINB1P30740 379 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 MTTPP55157 894 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 RAB38P57729 211 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 SLC26A5P58743 744 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 SRSF1Q07955 248 aaKnown RBP eCLIP14.38□□□□□ -0.11
NUP50-219ENST00000497960 GTF2H2Q13888 395 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 RUNX2Q13950 521 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 MEP1AQ16819 746 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 EIF2S3LQ2VIR3 472 aaKnown RBP14.38□□□□□ -0.11
NUP50-219ENST00000497960 ACER2Q5QJU3 275 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 H3F3CQ6NXT2 135 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 GTF2H2CQ6P1K8 395 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 ABHD17CQ6PCB6 329 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 GOLGA7Q7Z5G4 137 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 VN1R5Q7Z5H4 357 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 TMEM151AQ8N4L1 468 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 AMER2Q8N7J2 671 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 PRR7Q8TB68 274 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 GRHL3Q8TE85 626 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 TLCD1Q96CP7 247 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 PKNOX2Q96KN3 472 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 QRFPRQ96P65 431 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms