RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 LAPTM4BQ86VI4 370 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 CFAP52Q8N1V2 620 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 SGTBQ96EQ0 304 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 PKP4Q99569 1192 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 ABCG5Q9H222 651 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 PIGUQ9H490 435 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 IFT46Q9NQC8 304 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 SH3BP4Q9P0V3 963 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 FAM8A1Q9UBU6 413 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 REV1Q9UBZ9 1251 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 COL11A1P12107 1806 aaPredicted RBP12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 ARPC4-TTLL3A0A0A6YYG9 625 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 A0A1W2PPL8 197 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 TAPBPO15533 448 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 SLC43A1O75387 559 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 ANXA3P12429 323 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 GABRB1P18505 474 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 PTPN6P29350 595 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 ERVK-21P61565 698 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 DUOXA1Q1HG43 343 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 C17orf107Q6ZR85 190 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 MDGA1Q8NFP4 955 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 GATAD2BQ8WXI9 593 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 AP3S1Q92572 193 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 DOHHQ9BU89 302 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 KATNB1Q9BVA0 655 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 TSSK6Q9BXA6 273 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 SCPEP1Q9HB40 452 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 MRPL39Q9NYK5 338 aaKnown RBP12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 TVP23BQ9NYZ1 205 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 EXO1Q9UQ84 846 aaKnown RBP12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 PRRG1O14668 218 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 PCDH7O60245 1069 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 HCN1O60741 890 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 ATG13O75143 517 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 B3GALNT1O75752 331 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 ACSM4P0C7M7 580 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 RBBP4Q09028 425 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 COX10Q12887 443 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 MPPE1Q53F39 396 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 SHEQ5VZ18 495 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 SBSNQ6UWP8 590 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 IL20RBQ6UXL0 311 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 CASP12Q6UXS9 341 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 RTL4Q6ZR62 310 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 WDR53Q7Z5U6 358 aaPredicted RBP12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 PLPP6Q8IY26 295 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 NAGSQ8N159 534 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 OTUB1Q96FW1 271 aaPredicted RBP12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 GPR137Q96N19 417 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 MND1Q9BWT6 205 aa12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 SPRTNQ9H040 489 aaPredicted RBP12.52□□□□□ -0.41
GAPVD1-220ENST00000497580 GADD45GO95257 159 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 MPC2O95563 127 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 TBX18O95935 607 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 DHFRP00374 187 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 TPOP07202 933 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 HOXB6P17509 224 aaKnown RBP12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 CLCNKAP51800 687 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 ARHGAP1Q07960 439 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 PCBP2Q15366 365 aaKnown RBP eCLIP12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 MICAQ29983 383 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 TRILQ7L0X0 811 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 OR11H7Q8NGC8 314 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 MARVELD3Q96A59 401 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 RTP3Q9BQQ7 232 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 TMED9Q9BVK6 235 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 ZYG11BQ9C0D3 744 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 DIMT1Q9UNQ2 313 aaKnown RBP12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 A0A1W2PQH9 124 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 HHLA1C9JL84 531 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 M0R233 179 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 TPST2O60704 377 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 TTPAP49638 278 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 INSL4Q14641 139 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 BICRALQ6AI39 1079 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 FAM126AQ9BYI3 521 aaPredicted RBP12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 RANBP3Q9H6Z4 567 aaPredicted RBP12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 NMUR1Q9HB89 426 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 RAB23Q9ULC3 237 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 SBF1O95248 1867 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 RGS11O94810 467 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 GASTP01350 101 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 LAMP1P11279 417 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 GSTM5P46439 218 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 GBX2P52951 348 aaPredicted RBP12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 CRISP1P54107 249 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 HSF2Q03933 536 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 GNA13Q14344 377 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 TTLL9Q3SXZ7 439 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 IFI44LQ53G44 452 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 MLIPQ5VWP3 458 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 GPR139Q6DWJ6 353 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 USP45Q70EL2 814 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 LINC00518Q8N0U6 118 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 FTMTQ8N4E7 242 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 COQ8AQ8NI60 647 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 IGSF8Q969P0 613 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 COQ10AQ96MF6 247 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 MARVELD1Q9BSK0 173 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms