RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 CCNYL3P0C7X3 344 aa18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 SLC5A2P31639 672 aa18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 BUD31P41223 144 aaPredicted RBP18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 LIM2P55344 173 aa18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 CLDN8P56748 225 aa18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 GALNTL6Q49A17 601 aa18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 IL23RQ5VWK5 629 aa18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 MRPL14Q6P1L8 145 aaKnown RBP18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 DTX1Q86Y01 620 aa18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 ZNF595Q8IYB9 648 aa18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 SAMD14Q8IZD0 417 aaPredicted RBP18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 CA13Q8N1Q1 262 aa18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 GLB1L3Q8NCI6 653 aaPredicted RBP18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 TM4SF18Q96CE8 201 aa18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 ELAC2Q9BQ52 826 aaKnown RBP18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 EBF4Q9BQW3 602 aa18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 WDR41Q9HAD4 459 aa18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 SDR39U1Q9NRG7 319 aaPredicted RBP18.66■□□□□ 0.58
SCAMP3-209ENST00000497470 GNG14A0A1W2PPG7 69 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 VSTM2BA6NLU5 285 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 C21orf140B9A014 251 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 SAP18O00422 153 aaKnown RBP18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 CHST10O43529 356 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 TMPRSS11DO60235 418 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 RECKO95980 971 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 NTRK1P04629 796 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 ZNF28P17035 718 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 SDC1P18827 310 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 ITGAXP20702 1163 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 PRPS1L1P21108 318 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 FBLP22087 321 aaKnown RBP18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 JAK1P23458 1154 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 CERS1P27544 350 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 PPP2R1BP30154 601 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 KLC1Q07866 573 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 RUNX2Q13950 521 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 DPY19L1Q2PZI1 675 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 PDCD4Q53EL6 469 aaKnown RBP18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 GKAP1Q5VSY0 366 aaPredicted RBP18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 PRAMEF17Q5VTA0 474 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 FAM71E1Q6IPT2 247 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 R3HCC1LQ7Z5L2 792 aaKnown RBP18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 NLGN4XQ8N0W4 816 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 CPSF7Q8N684 471 aaKnown RBP18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 NLGN4YQ8NFZ3 816 aaPredicted RBP18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 OR51Q1Q8NH59 317 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 C16orf78Q8WTQ4 265 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 TANKQ92844 425 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 TBC1D20Q96BZ9 403 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 SCNM1Q9BWG6 230 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 GPR87Q9BY21 358 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 ZIM2Q9NZV7 527 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 ZNF282Q9UDV7 671 aaPredicted RBP18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 DLGAP4Q9Y2H0 992 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 ARL2BPQ9Y2Y0 163 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 MMACHCQ9Y4U1 282 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 GPR45Q9Y5Y3 372 aa18.65■□□□□ 0.58
SCAMP3-209ENST00000497470 TRABD2BA6NFA1 517 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 C9J4A7 227 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 SGK494L7N484 410 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 CYR61O00622 381 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 CLDN4O14493 209 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 ANKRD28O15084 1053 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 CCDC22O60826 627 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 STATHP02808 62 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 CLNS1AP54105 237 aaKnown RBP18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 HSD17B7P56937 341 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 TNFRSF17Q02223 184 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 FOXC1Q12948 553 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 ARHGAP40Q5TG30 622 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 NXNQ6DKJ4 435 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 PRSS41Q7RTY9 318 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 ERMP1Q7Z2K6 904 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 CAMKMTQ7Z624 323 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 TSPEARQ8WU66 669 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 PMEPA1Q969W9 287 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 COL26A1Q96A83 441 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 TESCQ96BS2 214 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 RILPQ96NA2 401 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 SLC22A11Q9NSA0 550 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 NDOR1Q9UHB4 597 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 PSME2Q9UL46 239 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 PCDHA9Q9Y5H5 950 aa18.64■□□□□ 0.57
SCAMP3-209ENST00000497470 DYTNA2CJ06 578 aa18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 PSMD12O00232 456 aaPredicted RBP18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 SH3BGRLO75368 114 aa18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 RDH16O75452 317 aa18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 BMP10O95393 424 aa18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 ALDOCP09972 364 aaKnown RBP18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 SNRPNP63162 240 aaKnown RBP18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 OCA2Q04671 838 aa18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 PDE7AQ13946 482 aa18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 FAM219BQ5XKK7 198 aa18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 COX15Q7KZN9 410 aa18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 RIMKLAQ8IXN7 391 aa18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 TMEM132CQ8N3T6 1108 aa18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 PLPP5Q8NEB5 264 aa18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 PRPF18Q99633 342 aaKnown RBP18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 EFHD1Q9BUP0 239 aa18.63■□□□□ 0.57
SCAMP3-209ENST00000497470 SORBS1Q9BX66 1292 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms