RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	KRBOX4	Q5JUW0	171 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CPZ	Q66K79	652 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PLAG1	Q6DJT9	500 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF621	Q6ZSS3	439 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TRMT11	Q7Z4G4	463 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MILR1	Q7Z6M3	343 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GLCCI1	Q86VQ1	547 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RNF139	Q8WU17	664 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SNX33	Q8WV41	574 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	AKT1S1	Q96B36	256 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RBP7	Q96R05	134 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FIZ1	Q96SL8	496 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	VRK1	Q99986	396 aa	Predicted RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	THAP7	Q9BT49	309 aa	Predicted RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF471	Q9BX82	626 aa	Predicted RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	EVA1A	Q9H8M9	152 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SARS2	Q9NP81	518 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DCAF13	Q9NV06	445 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	COA4	Q9NYJ1	87 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	AGO1	Q9UL18	857 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PTCH2	Q9Y6C5	1203 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	C2CD4B	A6NLJ0	364 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MPTX1	A8MV57	137 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LINC01387	J3KSC0	135 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SCAMP1	O15126	338 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LY86	O95711	162 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RLN1	P04808	185 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SPP1	P10451	314 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	BTF3	P20290	206 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SLC1A3	P43003	542 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SPCS3	P61009	180 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ABHD18	Q0P651	414 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PABPC1L2A	Q5JQF8	200 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	APOBEC3H	Q6NTF7	200 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF534	Q76KX8	674 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZFAND4	Q86XD8	727 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MCAT	Q8IVS2	390 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	IZUMO1	Q8IYV9	350 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ARL11	Q969Q4	196 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RAB3C	Q96E17	227 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	KLHL15	Q96M94	604 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HS6ST2	Q96MM7	605 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MCCC1	Q96RQ3	725 aa	Predicted RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DDO	Q99489	341 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OCSTAMP	Q9BR26	566 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TBC1D17	Q9HA65	648 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PRDM9	Q9NQV7	894 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DUSP22	Q9NRW4	184 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TMEM45A	Q9NWC5	275 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PCDHA10	Q9Y5I2	948 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549		V9GYH0	126 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FZD9	O00144	591 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PCDHGA12	O60330	932 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NDUFS3	O75489	264 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FARS2	O95363	451 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CPSF4	O95639	269 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	C1QA	P02745	245 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SRPRA	P08240	638 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ALPI	P09923	528 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	UBB	P0CG47	229 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	UBC	P0CG48	685 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	EIF2S3	P41091	472 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ANXA11	P50995	505 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RPS27A	P62979	156 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	UBA52	P62987	128 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LRRC32	Q14392	662 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	INTS6L	Q5JSJ4	861 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RANBP10	Q6VN20	620 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZDHHC17	Q8IUH5	632 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	B3GNT7	Q8NFL0	401 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR52J3	Q8NH60	311 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR56B4	Q8NH76	319 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	EEF1AKMT1	Q8WVE0	214 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ARNTL2	Q8WYA1	636 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	UPRT	Q96BW1	309 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TRMT61A	Q96FX7	289 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RHNO1	Q9BSD3	238 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DPH7	Q9BTV6	452 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DUSP16	Q9BY84	665 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	EQTN	Q9NQ60	294 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SMCO4	Q9NRQ5	59 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PLCXD1	Q9NUJ7	323 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NDRG4	Q9ULP0	352 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR10H1	Q9Y4A9	318 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	BAZ2A	Q9UIF9	1905 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MEGF6	O75095	1541 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FAM221B	A6H8Z2	402 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	BTBD17	A6NE02	478 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FAM74A7	A6NL05	159 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PPEF2	O14830	753 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MFSD11	O43934	449 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ENTPD6	O75354	484 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	POP7	O75817	140 aa	Known RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MT-CYB	P00156	380 aa	Predicted RBP	7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FBP1	P09467	338 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HK1	P19367	917 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PTPN6	P29350	595 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CDH12	P55289	794 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FAM74A3	Q4VXF1	159 aa		7.87	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FAM171A1	Q5VUB5	890 aa		7.87	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms