RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 SH3BGRLO75368 114 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 SEC24DO94855 1032 aaPredicted RBP15.4■□□□□ 0.06
SF3A1-209ENST00000496189 PDGFAP04085 211 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 CERS1P27544 350 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 CDH13P55290 713 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 HSD17B7P56937 341 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 TAS2R50P59544 299 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 LCP2Q13094 533 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 SLC13A2Q13183 592 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 GGTA1PQ4G0N0 100 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 UNC50Q53HI1 259 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 TNFAIP8L3Q5GJ75 292 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 DEPDC1Q5TB30 811 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 ADNP2Q6IQ32 1131 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 PAPD4Q6PIY7 484 aaKnown RBP15.4■□□□□ 0.06
SF3A1-209ENST00000496189 ISLR2Q6UXK2 745 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 ZNF595Q8IYB9 648 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 OR52B6Q8NGF0 335 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 TRPC4APQ8TEL6 797 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 NSUN5Q96P11 429 aaKnown RBP15.4■□□□□ 0.06
SF3A1-209ENST00000496189 QRFPRQ96P65 431 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 ZNF382Q96SR6 550 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 SERPINI1Q99574 410 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 ILKAPQ9H0C8 392 aaPredicted RBP15.4■□□□□ 0.06
SF3A1-209ENST00000496189 VIPAS39Q9H9C1 493 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 ZBTB26Q9HCK0 441 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 LYRM4Q9HD34 91 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 KCNK9Q9NPC2 374 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 DMRT3Q9NQL9 472 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 PRTFDC1Q9NRG1 225 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 NMRK1Q9NWW6 199 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 MS4A12Q9NXJ0 267 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 AHSPQ9NZD4 102 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 ABI3Q9P2A4 366 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 SNX6Q9UNH7 406 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 SPTA1P02549 2419 aa15.4■□□□□ 0.06
SF3A1-209ENST00000496189 TLN1Q9Y490 2541 aaKnown RBP15.39■□□□□ 0.05
SF3A1-209ENST00000496189 DYTNA2CJ06 578 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 TTLL8A6PVC2 850 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 C4orf51C9J302 202 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 FOXE1O00358 373 aaPredicted RBP15.39■□□□□ 0.05
SF3A1-209ENST00000496189 TRIM13O60858 407 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 ZWINTO95229 277 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 PLA2G2AP14555 144 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 HIST1H1TP22492 207 aaPredicted RBP15.39■□□□□ 0.05
SF3A1-209ENST00000496189 TLX1P31314 330 aaPredicted RBP15.39■□□□□ 0.05
SF3A1-209ENST00000496189 NAGLUP54802 743 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 PKNOX1P55347 436 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 TRAF3Q13114 568 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 CUL3Q13618 768 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 RUNX2Q13950 521 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 FRG2Q64ET8 278 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 PLAG1Q6DJT9 500 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 OR4C11Q6IEV9 310 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 IGFL3Q6UXB1 125 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 GPRIN3Q6ZVF9 776 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 C10orf107Q8IVU9 208 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 EFCAB3Q8N7B9 438 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 ACOT4Q8N9L9 421 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 FAM47BQ8NA70 645 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 OR4F6Q8NGB9 312 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 M1APQ8TC57 530 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 TSLPQ969D9 159 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 PNPLA2Q96AD5 504 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 CDK15Q96Q40 435 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 FRG2BQ96QU4 278 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 LMF1Q96S06 567 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 MFRPQ9BY79 579 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 AICDAQ9GZX7 198 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 OR51B5Q9H339 312 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 C12orf65Q9H3J6 166 aaKnown RBP15.39■□□□□ 0.05
SF3A1-209ENST00000496189 TMBIM4Q9HC24 238 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 PSD3Q9NYI0 1048 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 PTGFRNQ9P2B2 879 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 SLC17A7Q9P2U7 560 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 PHF11Q9UIL8 331 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 DAPP1Q9UN19 280 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 B3GNT3Q9Y2A9 372 aa15.39■□□□□ 0.05
SF3A1-209ENST00000496189 PCSK5Q92824 1860 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 IGHV3-20A0A0C4DH32 117 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 OR2W5A6NFC9 320 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 SAP18O00422 153 aaKnown RBP15.38■□□□□ 0.05
SF3A1-209ENST00000496189 CREB1P16220 341 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 TSPAN8P19075 237 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 MAOAP21397 527 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 CPN2P22792 545 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 ATP5A1P25705 553 aaKnown RBP15.38■□□□□ 0.05
SF3A1-209ENST00000496189 BUD31P41223 144 aaPredicted RBP15.38■□□□□ 0.05
SF3A1-209ENST00000496189 LIM2P55344 173 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 RPS13P62277 151 aaKnown RBP15.38■□□□□ 0.05
SF3A1-209ENST00000496189 TLE1Q04724 770 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 STX4Q12846 297 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 MFAP5Q13361 173 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 PCLAFQ15004 111 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 ABHD17BQ5VST6 288 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 CYP20A1Q6UW02 462 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 LINC00696Q6ZRV3 163 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 RPS27LQ71UM5 84 aaKnown RBP15.38■□□□□ 0.05
SF3A1-209ENST00000496189 PAGE2Q7Z2X7 111 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 HOMEZQ8IX15 550 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms