RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 RHDQ02161 417 aa18.3■□□□□ 0.52
HDAC4-212ENST00000495497 TUBB8Q3ZCM7 444 aa18.3■□□□□ 0.52
HDAC4-212ENST00000495497 C10orf62Q5T681 223 aaPredicted RBP18.3■□□□□ 0.52
HDAC4-212ENST00000495497 OR11G2Q8NGC1 345 aa18.3■□□□□ 0.52
HDAC4-212ENST00000495497 TRMOQ9BU70 441 aa18.3■□□□□ 0.52
HDAC4-212ENST00000495497 TRIM55Q9BYV6 548 aa18.3■□□□□ 0.52
HDAC4-212ENST00000495497 ACPTQ9BZG2 426 aa18.3■□□□□ 0.52
HDAC4-212ENST00000495497 ZNF395Q9H8N7 513 aaPredicted RBP18.3■□□□□ 0.52
HDAC4-212ENST00000495497 BRF2Q9HAW0 419 aa18.3■□□□□ 0.52
HDAC4-212ENST00000495497 FBXL4Q9UKA2 621 aa18.3■□□□□ 0.52
HDAC4-212ENST00000495497 ITPR1Q14643 2758 aa18.3■□□□□ 0.52
HDAC4-212ENST00000495497 IGHV3-20A0A0C4DH32 117 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 PEX12O00623 359 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 AZIN1O14977 448 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 TMPRSS11DO60235 418 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 ITGB2P05107 769 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 C8orf89P0DMQ9 161 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 UROSP10746 265 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 MAOAP21397 527 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 IL10P22301 178 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 TBL3Q12788 808 aaKnown RBP18.29■□□□□ 0.52
HDAC4-212ENST00000495497 CSTF3Q12996 717 aaKnown RBP18.29■□□□□ 0.52
HDAC4-212ENST00000495497 PCSK4Q6UW60 755 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 TMEM205Q6UW68 189 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 METTL4Q8N3J2 472 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 AGR3Q8TD06 166 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 APOBEC4Q8WW27 367 aaKnown RBP18.29■□□□□ 0.52
HDAC4-212ENST00000495497 DDX31Q9H8H2 851 aaKnown RBP18.29■□□□□ 0.52
HDAC4-212ENST00000495497 VPS29Q9UBQ0 182 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 RALYQ9UKM9 306 aaKnown RBP18.29■□□□□ 0.52
HDAC4-212ENST00000495497 PTGDR2Q9Y5Y4 395 aa18.29■□□□□ 0.52
HDAC4-212ENST00000495497 A0A0A6YYD5 115 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 MYOCOSA0A1B0GUC4 107 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 H3BQF6 201 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 CYR61O00622 381 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 SEMA3DO95025 777 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 KLK1P06870 262 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 NEFHP12036 1026 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 ACPPP15309 386 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 CPN2P22792 545 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 JAK1P23458 1154 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 TPP2P29144 1249 aaPredicted RBP18.28■□□□□ 0.52
HDAC4-212ENST00000495497 TSFMP43897 325 aaKnown RBP18.28■□□□□ 0.52
HDAC4-212ENST00000495497 ARFIP1P53367 373 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 HNRNPH2P55795 449 aaKnown RBP18.28■□□□□ 0.52
HDAC4-212ENST00000495497 BTKQ06187 659 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 GALNT1Q10472 559 aaPredicted RBP18.28■□□□□ 0.52
HDAC4-212ENST00000495497 ANKRD37Q7Z713 158 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 NUDT13Q86X67 352 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 ZCCHC7Q8N3Z6 543 aaKnown RBP18.28■□□□□ 0.52
HDAC4-212ENST00000495497 EFCAB3Q8N7B9 438 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 GOLGA6L1Q8N7Z2 621 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 PLPP5Q8NEB5 264 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 METTL21AQ8WXB1 218 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 PTCHD1Q96NR3 888 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 IP6K3Q96PC2 410 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 ARHGAP9Q9BRR9 750 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 ING2Q9H160 280 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 EML4Q9HC35 981 aaKnown RBP18.28■□□□□ 0.52
HDAC4-212ENST00000495497 LYRM4Q9HD34 91 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 NECTIN3Q9NQS3 549 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 NKIRAS1Q9NYS0 192 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 ATG4BQ9Y4P1 393 aa18.28■□□□□ 0.52
HDAC4-212ENST00000495497 PRMT3O60678 531 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 PRKRAO75569 313 aaKnown RBP18.27■□□□□ 0.52
HDAC4-212ENST00000495497 SERPINE1P05121 402 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 FAM87AP0C7U9 286 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 COX6A1P12074 109 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 HSD3B1P14060 373 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 HSD3B2P26439 372 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 SERPINB5P36952 375 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 CCL11P51671 97 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 POLE2P56282 527 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 NSDHLQ15738 373 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 SH2D4BQ5SQS7 431 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 KANK2Q63ZY3 851 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 C18orf63Q68DL7 685 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 MRM1Q6IN84 353 aaKnown RBP18.27■□□□□ 0.52
HDAC4-212ENST00000495497 CYP20A1Q6UW02 462 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 COMMD6Q7Z4G1 85 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 CLNKQ7Z7G1 428 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 C1orf52Q8N6N3 182 aaKnown RBP18.27■□□□□ 0.52
HDAC4-212ENST00000495497 CHTF18Q8WVB6 975 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 UCN3Q969E3 161 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 NACC2Q96BF6 587 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 APIPQ96GX9 242 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 C20orf27Q9GZN8 174 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 PRTFDC1Q9NRG1 225 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 AHSPQ9NZD4 102 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 ZDHHC2Q9UIJ5 367 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 TRAF6Q9Y4K3 522 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 ASB4Q9Y574 426 aa18.27■□□□□ 0.52
HDAC4-212ENST00000495497 LOC102723996A0A087X1L8 192 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 ARHGAP10A1A4S6 786 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 SERTM1A2A2V5 107 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 A6NL46 340 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 TGFBR3LH3BV60 316 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 ERVH48-1M5A8F1 160 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 HSPA4LO95757 839 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 FAM58BPP0C7Q3 252 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms