RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 ZNF274Q96GC6 653 aaPredicted RBP3.99□□□□□ -1.77
NCL-210ENST00000494618 ATG101Q9BSB4 218 aa3.99□□□□□ -1.77
NCL-210ENST00000494618 CCM2Q9BSQ5 444 aa3.99□□□□□ -1.77
NCL-210ENST00000494618 EDEM3Q9BZQ6 932 aa3.99□□□□□ -1.77
NCL-210ENST00000494618 LSG1Q9H089 658 aaKnown RBP3.99□□□□□ -1.77
NCL-210ENST00000494618 ITGA11Q9UKX5 1188 aa3.99□□□□□ -1.77
NCL-210ENST00000494618 YDJCA8MPS7 323 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 CLN5O75503 358 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 KRTAP1-4P0C5Y4 121 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 FAM200BP0CF97 657 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 SLC1A6P48664 564 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 PEX3P56589 373 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 TEX35Q5T0J7 233 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 HIPK1Q86Z02 1210 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 C8orf46Q8TAG6 207 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 UBLCP1Q8WVY7 318 aaPredicted RBP3.98□□□□□ -1.77
NCL-210ENST00000494618 LIPHQ8WWY8 451 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 SEPT8Q92599 483 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 FAM162AQ96A26 154 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 RUNDC3BQ96NL0 473 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 C17orf62Q9BQA9 187 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 IDI2Q9BXS1 227 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 S100A14Q9HCY8 104 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 CLEC5AQ9NY25 188 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 GIMAP2Q9UG22 337 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 SPATA2Q9UM82 520 aa3.98□□□□□ -1.77
NCL-210ENST00000494618 NIP7Q9Y221 180 aaKnown RBP eCLIP3.98□□□□□ -1.771e-57■■■□□ 14.8
NCL-210ENST00000494618 MRPL11Q9Y3B7 192 aaKnown RBP3.98□□□□□ -1.77
NCL-210ENST00000494618 HBS1LQ9Y450 684 aaKnown RBP3.98□□□□□ -1.77
NCL-210ENST00000494618 SALL1Q9NSC2 1324 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 CCDC162PA2VCL2 907 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 TMCO5BA8MYB1 307 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 ANHXE9PGG2 379 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 TIMM44O43615 452 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 IFNAR1P17181 557 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 IER3P46695 156 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 ZNF776Q68DI1 518 aaPredicted RBP3.97□□□□□ -1.77
NCL-210ENST00000494618 CAVIN1Q6NZI2 390 aaKnown RBP3.97□□□□□ -1.77
NCL-210ENST00000494618 ALKBH5Q6P6C2 394 aaKnown RBP3.97□□□□□ -1.77
NCL-210ENST00000494618 NLRP14Q86W24 1093 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 KLHL7Q8IXQ5 586 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 TDHQ8IZJ6 230 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 ZNF444Q8N0Y2 327 aaPredicted RBP3.97□□□□□ -1.77
NCL-210ENST00000494618 SMYD1Q8NB12 490 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 KIAA1524Q8TCG1 905 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 RCHY1Q96PM5 261 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 APOL2Q9BQE5 337 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 VSIG4Q9Y279 399 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 SH3GLB1Q9Y371 365 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 CPQQ9Y646 472 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 POMT1Q9Y6A1 747 aa3.97□□□□□ -1.77
NCL-210ENST00000494618 TRBV5-4A0A0C4DH59 114 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 LOC390937A0A1W2PQ73 354 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 ANKDD1BA6NHY2 528 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 M0R296 226 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 P2RX6O15547 441 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 RAD51DO75771 328 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 OR6B1O95007 311 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 SCG2P13521 617 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 ACKR3P25106 362 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 PPP2R1AP30153 589 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 MATKP42679 507 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 GPR50Q13585 617 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 RUNX3Q13761 415 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 ATAD3CQ5T2N8 411 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 PM20D1Q6GTS8 502 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 MSANTD1Q6ZTZ1 278 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 SERINC5Q86VE9 423 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 KIAA0895Q8NCT3 520 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 BEST4Q8NFU0 473 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 ITLN1Q8WWA0 313 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 SERAC1Q96JX3 654 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 HSD17B14Q9BPX1 270 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 GPR173Q9NS66 373 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 MED17Q9NVC6 651 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 SLCO1C1Q9NYB5 712 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 VPS18Q9P253 973 aa3.96□□□□□ -1.78
NCL-210ENST00000494618 CTDSPLO15194 276 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 SEMA4FO95754 770 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 THY1P04216 161 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 LYNP07948 512 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 CASTP20810 708 aaKnown RBP3.95□□□□□ -1.78
NCL-210ENST00000494618 PPIAP62937 165 aaKnown RBP3.95□□□□□ -1.78
NCL-210ENST00000494618 RPS27AP62979 156 aaKnown RBP3.95□□□□□ -1.78
NCL-210ENST00000494618 ITPK1Q13572 414 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 Q1RN00 199 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 VWA2Q5GFL6 755 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 NHLRC3Q5JS37 347 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 RSBN1Q5VWQ0 802 aaPredicted RBP3.95□□□□□ -1.78
NCL-210ENST00000494618 LIPJQ5W064 366 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 SIX6OS1Q8N1H7 587 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 CLEC1AQ8NC01 280 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 AFAP1L1Q8TED9 768 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 DEPDC1BQ8WUY9 529 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 CUTCQ9NTM9 273 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 ABCD2Q9UBJ2 740 aa3.95□□□□□ -1.78
NCL-210ENST00000494618 SLC30A4O14863 429 aa3.94□□□□□ -1.78
NCL-210ENST00000494618 LETM1O95202 739 aaPredicted RBP3.94□□□□□ -1.78
NCL-210ENST00000494618 CCND3P30281 292 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms