RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ARHGAP19Q14CB8 494 aa13.17□□□□□ -0.3
VCP-207ENST00000493886 ZNF776Q68DI1 518 aaPredicted RBP13.17□□□□□ -0.3
VCP-207ENST00000493886 CEP68Q76N32 757 aa13.17□□□□□ -0.3
VCP-207ENST00000493886 VN1R5Q7Z5H4 357 aa13.17□□□□□ -0.3
VCP-207ENST00000493886 C17orf64Q86WR6 236 aa13.17□□□□□ -0.3
VCP-207ENST00000493886 ZDHHC21Q8IVQ6 265 aa13.17□□□□□ -0.3
VCP-207ENST00000493886 OR4A15Q8NGL6 344 aa13.17□□□□□ -0.3
VCP-207ENST00000493886 OR5K1Q8NHB7 308 aa13.17□□□□□ -0.3
VCP-207ENST00000493886 ZFP90Q8TF47 636 aa13.17□□□□□ -0.3
VCP-207ENST00000493886 C16orf78Q8WTQ4 265 aa13.17□□□□□ -0.3
VCP-207ENST00000493886 RDH12Q96NR8 316 aa13.17□□□□□ -0.3
VCP-207ENST00000493886 PRDM8Q9NQV8 689 aa13.17□□□□□ -0.3
VCP-207ENST00000493886 TAC3Q9UHF0 121 aa13.17□□□□□ -0.3
VCP-207ENST00000493886 C3orf18Q9UK00 162 aa13.17□□□□□ -0.3
VCP-207ENST00000493886 FUOMA2VDF0 154 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 TSPAN9O75954 239 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 KLK1P06870 262 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 PPIBP23284 216 aaKnown RBP13.16□□□□□ -0.3
VCP-207ENST00000493886 EPHA2P29317 976 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 TRIM23P36406 574 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 KIR2DL1P43626 348 aaPredicted RBP13.16□□□□□ -0.3
VCP-207ENST00000493886 MC1RQ01726 317 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 LRRC74AQ0VAA2 488 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 VTCN1Q7Z7D3 282 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 DCP2Q8IU60 420 aaKnown RBP13.16□□□□□ -0.3
VCP-207ENST00000493886 SYNPOQ8N3V7 929 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 OR4K1Q8NGD4 311 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 POLMQ9NP87 494 aaPredicted RBP13.16□□□□□ -0.3
VCP-207ENST00000493886 USE1Q9NZ43 259 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 ERVK-18Q9QC07 812 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 ZNF282Q9UDV7 671 aaPredicted RBP13.16□□□□□ -0.3
VCP-207ENST00000493886 TMEFF2Q9UIK5 374 aaPredicted RBP13.16□□□□□ -0.3
VCP-207ENST00000493886 RPS6KA6Q9UK32 745 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 PCDHGA3Q9Y5H0 932 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 PRR23AA6NEV1 266 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 GPR89AB7ZAQ6 455 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 K7EQS6 105 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 KLHL18O94889 574 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 ANGPTL1O95841 491 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 ABCB1P08183 1280 aaPredicted RBP13.16□□□□□ -0.3
VCP-207ENST00000493886 FURINP09958 794 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 SLC35G4P0C7Q5 338 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 GPR89BP0CG08 455 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 JUNBP17275 347 aaPredicted RBP13.16□□□□□ -0.3
VCP-207ENST00000493886 IGFBP5P24593 272 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 TGFBR1P36897 503 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 CLCNKAP51800 687 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 C2orf80Q0P641 193 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 LAIR1Q6GTX8 287 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 CYP4Z1Q86W10 505 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 TP53I13Q8NBR0 393 aaPredicted RBP13.16□□□□□ -0.3
VCP-207ENST00000493886 NDNFQ8TB73 568 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 FKBP10Q96AY3 582 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 CHST8Q9H2A9 424 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 TRIT1Q9H3H1 467 aaKnown RBP13.16□□□□□ -0.3
VCP-207ENST00000493886 MYNNQ9NPC7 610 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 PHPT1Q9NRX4 125 aaPredicted RBP13.16□□□□□ -0.3
VCP-207ENST00000493886 SATB2Q9UPW6 733 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 CORO2BQ9UQ03 480 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 ORC6Q9Y5N6 252 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.16□□□□□ -0.3
VCP-207ENST00000493886 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.16□□□□□ -0.3
VCP-207ENST00000493886 TRIM64BA6NI03 449 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 CBFA2T3O75081 653 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 ZNF254O75437 659 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 NTRK1P04629 796 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 NUDT7P0C024 238 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 PTX3P26022 381 aaPredicted RBP13.16□□□□□ -0.3
VCP-207ENST00000493886 TEAD1P28347 426 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 HSD17B2P37059 387 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 TAS2R50P59544 299 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 PDE7AQ13946 482 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 VEZF1Q14119 521 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 RGNQ15493 299 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 FAM71E1Q6IPT2 247 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 KIAA1211LQ6NV74 962 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 GANCQ8TET4 914 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 UBE2FQ969M7 185 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 MENTQ9BUN1 341 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 SPATA9Q9BWV2 254 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 C12orf4Q9NQ89 552 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 RASSF1Q9NS23 344 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 TBCCD1Q9NVR7 557 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 DCAF16Q9NXF7 216 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 GPSM3Q9Y4H4 160 aa13.16□□□□□ -0.3
VCP-207ENST00000493886 H3BUI4 141 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 FADS2O95864 444 aaKnown RBP13.15□□□□□ -0.3
VCP-207ENST00000493886 ACP5P13686 325 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 PSMB9P28065 219 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 RPL3P39023 403 aaKnown RBP13.15□□□□□ -0.3
VCP-207ENST00000493886 TNFRSF4P43489 277 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 VBP1P61758 197 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 EMX1Q04741 257 aaPredicted RBP13.15□□□□□ -0.3
VCP-207ENST00000493886 RGS21Q2M5E4 152 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 TMEM236Q5W0B7 351 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 SLCO6A1Q86UG4 719 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 PJA1Q8NG27 643 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 PPCDCQ96CD2 204 aa13.15□□□□□ -0.3
VCP-207ENST00000493886 MKRN2Q9H000 416 aaKnown RBP13.15□□□□□ -0.3
VCP-207ENST00000493886 PELI2Q9HAT8 420 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms