RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 SNAI1O95863 264 aaPredicted RBP3.08□□□□□ -1.92
CD46-217ENST00000493796 IGHEP01854 428 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 CSN3P07498 182 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 TSPY3P0CV98 308 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 TSPY8P0CW00 308 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 SAGP10523 405 aaPredicted RBP3.08□□□□□ -1.92
CD46-217ENST00000493796 ACADSP16219 412 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 RPL35AP18077 110 aaKnown RBP3.08□□□□□ -1.92
CD46-217ENST00000493796 CD27P26842 260 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 RBMS1P29558 406 aaKnown RBP3.08□□□□□ -1.92
CD46-217ENST00000493796 HOXC13P31276 330 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 PCGF2P35227 344 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 KRT2P35908 639 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 TSFMP43897 325 aaKnown RBP3.08□□□□□ -1.92
CD46-217ENST00000493796 XGP55808 180 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 POLR2LP62875 67 aaKnown RBP3.08□□□□□ -1.92
CD46-217ENST00000493796 MS4A2Q01362 244 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 MYL7Q01449 175 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 ALCAMQ13740 583 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 LY6DQ14210 128 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 BECN1Q14457 450 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 NPTX1Q15818 432 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 IMMTQ16891 758 aaKnown RBP3.08□□□□□ -1.92
CD46-217ENST00000493796 LETM2Q2VYF4 491 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 OR4A47Q6IF82 309 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 FRRS1Q6ZNA5 592 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 GPRIN3Q6ZVF9 776 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 TMEM179Q6ZVK1 233 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 CENPVQ7Z7K6 275 aaPredicted RBP3.08□□□□□ -1.92
CD46-217ENST00000493796 SPAG16Q8N0X2 631 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 TTC30BQ8N4P2 665 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 ANKRD13CQ8N6S4 541 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 POGLUT1Q8NBL1 392 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 GMCL1P1Q8NEA9 526 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 OR7A2PQ8NGA2 310 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 NCOA7Q8NI08 942 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 CD99L2Q8TCZ2 262 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 MUS81Q96NY9 551 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 FEVQ99581 238 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 CPNE1Q99829 537 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 NUDT16L1Q9BRJ7 211 aaKnown RBP3.08□□□□□ -1.92
CD46-217ENST00000493796 PRRG4Q9BZD6 226 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 SLC38A10Q9HBR0 1119 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 VPS54Q9P1Q0 977 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 STX8Q9UNK0 236 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 CHKBQ9Y259 395 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 TRIP11Q15643 1979 aa3.08□□□□□ -1.92
CD46-217ENST00000493796 SPTBN5Q9NRC6 3674 aaKnown RBP3.08□□□□□ -1.92
CD46-217ENST00000493796 KIAA0100Q14667 2235 aaKnown RBP3.08□□□□□ -1.92
CD46-217ENST00000493796 ANK1P16157 1881 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 ATG2AQ2TAZ0 1938 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 TMEM150BA6NC51 233 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 HIP1O00291 1037 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 PSMD10O75832 226 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 STBD1O95210 358 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 ACSL3O95573 720 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 ATP5BP06576 529 aaKnown RBP3.07□□□□□ -1.92
CD46-217ENST00000493796 ASNSP08243 561 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 TOP1P11387 765 aaKnown RBP3.07□□□□□ -1.92
CD46-217ENST00000493796 EPCAMP16422 314 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 CYP11B2P19099 503 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 DNA2P51530 1060 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 TRAP1Q12931 704 aaKnown RBP3.07□□□□□ -1.92
CD46-217ENST00000493796 GPR33Q49SQ1 333 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 GPR139Q6DWJ6 353 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 BLOC1S2Q6QNY1 142 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 ZBTB49Q6ZSB9 765 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 IL17RELQ6ZVW7 336 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 ENOSF1Q7L5Y1 443 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 DET1Q7L5Y6 550 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 ANKRD23Q86SG2 305 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 PRPF39Q86UA1 669 aaKnown RBP3.07□□□□□ -1.92
CD46-217ENST00000493796 IQCHQ86VS3 1027 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 LMNTD2Q8IXW0 634 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 MAML2Q8IZL2 1156 aaPredicted RBP3.07□□□□□ -1.92
CD46-217ENST00000493796 ZNF444Q8N0Y2 327 aaPredicted RBP3.07□□□□□ -1.92
CD46-217ENST00000493796 Q8N377 158 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 KLHDC1Q8N7A1 406 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 FAM133AQ8N9E0 248 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 POMGNT2Q8NAT1 580 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 AQP11Q8NBQ7 271 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 SNX21Q969T3 373 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 ZNF274Q96GC6 653 aaPredicted RBP3.07□□□□□ -1.92
CD46-217ENST00000493796 LINC00615Q96LM1 132 aaPredicted RBP3.07□□□□□ -1.92
CD46-217ENST00000493796 MAP3K3Q99759 626 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 SLC2A11Q9BYW1 496 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 POLD4Q9HCU8 107 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 SLC7A10Q9NS82 523 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.07□□□□□ -1.92
CD46-217ENST00000493796 NDE1Q9NXR1 346 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 WRAP73Q9P2S5 460 aaPredicted RBP3.07□□□□□ -1.92
CD46-217ENST00000493796 SWAP70Q9UH65 585 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 MUTYHQ9UIF7 546 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 AGTPBP1Q9UPW5 1226 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 GRIN2DO15399 1336 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 GBF1Q92538 1859 aa3.07□□□□□ -1.92
CD46-217ENST00000493796 MYH9P35579 1960 aaKnown RBP3.07□□□□□ -1.92
CD46-217ENST00000493796 IGLV3-22A0A075B6J6 115 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 A0A1W2PPR1 153 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 TRBC2A0A5B9 178 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms