RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 TMEM35AQ53FP2 167 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 SAXO2Q658L1 398 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 FAM83HQ6ZRV2 1179 aaPredicted RBP9.21□□□□□ -0.94
NPHP3-209ENST00000493732 SLC5A8Q8N695 610 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 MINDY2Q8NBR6 621 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 C9orf43Q8TAL5 461 aaPredicted RBP9.21□□□□□ -0.94
NPHP3-209ENST00000493732 PHF10Q8WUB8 498 aaKnown RBP9.21□□□□□ -0.94
NPHP3-209ENST00000493732 HSPBAP1Q96EW2 488 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 CRELD1Q96HD1 420 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 SIGLEC11Q96RL6 698 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 ZNF607Q96SK3 696 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 TEX101Q9BY14 249 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 PRSS16Q9NQE7 514 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 RASSF1Q9NS23 344 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 IMPAD1Q9NX62 359 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 TAS2R7Q9NYW3 318 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 EHD3Q9NZN3 535 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 TAAR2Q9P1P5 351 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 TAC3Q9UHF0 121 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 PSORS1C1Q9UIG5 152 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 TMCC3Q9ULS5 477 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 DENND4AQ7Z401 1863 aa9.21□□□□□ -0.94
NPHP3-209ENST00000493732 TRBC2A0A5B9 178 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 OR2A25A4D2G3 310 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 KPNA4O00629 521 aaPredicted RBP9.2□□□□□ -0.94
NPHP3-209ENST00000493732 PLPP1O14494 284 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 SH3BP5O60239 455 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 CLEC3AO75596 197 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 SERPINB7O75635 380 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 ZBTB11O95625 1053 aaPredicted RBP9.2□□□□□ -0.94
NPHP3-209ENST00000493732 OXSR1O95747 527 aaPredicted RBP9.2□□□□□ -0.94
NPHP3-209ENST00000493732 C5AR1P21730 350 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 CD6P30203 668 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 BSGP35613 385 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 FRKP42685 505 aaPredicted RBP9.2□□□□□ -0.94
NPHP3-209ENST00000493732 MAPK10P53779 464 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 MEF2AQ02078 507 aaPredicted RBP9.2□□□□□ -0.94
NPHP3-209ENST00000493732 GNA13Q14344 377 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 NR1D2Q14995 579 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 MPEG1Q2M385 716 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 COLEC12Q5KU26 742 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 PIP5KL1Q5T9C9 394 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 GPR153Q6NV75 609 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 BHLHB9Q6PI77 547 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 CEACAM20Q6UY09 585 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 ZNF852Q6ZMS4 543 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 CCDC81Q6ZN84 652 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 VN1R5Q7Z5H4 357 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 ADCK1Q86TW2 530 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 SLCO6A1Q86UG4 719 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 TAGAPQ8N103 731 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 ZNF740Q8NDX6 193 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 CHPT1Q8WUD6 406 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 PROX1Q92786 737 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 SLC38A4Q969I6 547 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 TM4SF18Q96CE8 201 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 TEFMQ96QE5 360 aaKnown RBP9.2□□□□□ -0.94
NPHP3-209ENST00000493732 TIMM29Q9BSF4 260 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 SPATA5L1Q9BVQ7 753 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 FAIM2Q9BWQ8 316 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 PHPT1Q9NRX4 125 aaPredicted RBP9.2□□□□□ -0.94
NPHP3-209ENST00000493732 DZANK1Q9NVP4 752 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 RAB23Q9ULC3 237 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 RNF6Q9Y252 685 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 TMEM98Q9Y2Y6 226 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 PCDHGA2Q9Y5H1 932 aa9.2□□□□□ -0.94
NPHP3-209ENST00000493732 MUC22E2RYF6 1773 aaPredicted RBP9.2□□□□□ -0.94
NPHP3-209ENST00000493732 NUP214P35658 2090 aaPredicted RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 EFCAB10A6NFE3 127 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 KLHL18O94889 574 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 FADS2O95864 444 aaKnown RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 ADAP00813 363 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 CDK1P06493 297 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 UGT2B10P36537 528 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 RANBP1P43487 201 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 LIMS1P48059 325 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 ALDH9A1P49189 494 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 HTRA3P83110 453 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 GPM6BQ13491 265 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 AQP6Q13520 282 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 RUNX3Q13761 415 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 EXOC3L2Q2M3D2 409 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 SPDYE7PQ495Y7 208 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 TMC5Q6UXY8 1006 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 AHSA2Q719I0 299 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 TSEN54Q7Z6J9 526 aaKnown RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 ZNF554Q86TJ5 538 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 SLC44A2Q8IWA5 706 aaPredicted RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 YAF2Q8IY57 180 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 DNAJC22Q8N4W6 341 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 LINC00471Q8N535 108 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 SLC15A4Q8N697 577 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 PSMA8Q8TAA3 256 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 FGF13Q92913 245 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 ABTB1Q969K4 478 aaPredicted RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 SH3YL1Q96HL8 342 aaPredicted RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 Q96MT0 163 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 COL21A1Q96P44 957 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 IL17FQ96PD4 163 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms