RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 LKAAEAR1Q8TD35 194 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 CHTF18Q8WVB6 975 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 KIAA1143Q96AT1 154 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-210ENST00000493582 KCTD7Q96MP8 289 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 RPRD1AQ96P16 312 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-210ENST00000493582 MND1Q9BWT6 205 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 FAM126AQ9BYI3 521 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-210ENST00000493582 ARHGAP39Q9C0H5 1083 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 FTSJ1Q9UET6 329 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 TRPS1Q9UHF7 1281 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 PCDHGB7Q9Y5F8 929 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 DNAJC25-GNG10A0A024R161 153 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 TRAV6A0A075B6T7 132 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 CNMDO75829 334 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 NCR1O76036 304 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 PCSK1P29120 753 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 SMSP52788 366 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 CRTC2Q53ET0 693 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-210ENST00000493582 PTRHD1Q6GMV3 140 aaKnown RBP11.2□□□□□ -0.62
HDAC4-210ENST00000493582 SYT12Q8IV01 421 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 FAM46DQ8NEK8 389 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 PPTC7Q8NI37 304 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 ST8SIA4Q92187 359 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 TM9SF4Q92544 642 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 RBPMSQ93062 196 aaKnown RBP11.2□□□□□ -0.62
HDAC4-210ENST00000493582 BOCQ9BWV1 1114 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 MS4A7Q9GZW8 240 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-210ENST00000493582 ACER3Q9NUN7 267 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 APOL3O95236 402 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 STK19P49842 368 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-210ENST00000493582 RPS25P62851 125 aaKnown RBP11.2□□□□□ -0.62
HDAC4-210ENST00000493582 LGALSLQ3ZCW2 172 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-210ENST00000493582 NOXRED1Q6NXP6 359 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 TAPT1Q6NXT6 567 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 CHMP1BQ7LBR1 199 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 TLK2Q86UE8 772 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 GPALPP1Q8IXQ4 340 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 CFAP52Q8N1V2 620 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 OR10Z1Q8NGY1 313 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 LILRB1Q8NHL6 650 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-210ENST00000493582 FATE1Q969F0 183 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 LINC00052Q96N35 136 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 SLC6A18Q96N87 628 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 RBP7Q96R05 134 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 KCNJ15Q99712 375 aa11.2□□□□□ -0.62
HDAC4-210ENST00000493582 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.2□□□□□ -0.62
HDAC4-210ENST00000493582 PRR23AA6NEV1 266 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 TLR4O00206 839 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 ATG13O75143 517 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 SH3BGRLO75368 114 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 STK16O75716 305 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 IFNA16P05015 189 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 C1SP09871 688 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 CTPS1P17812 591 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 EPORP19235 508 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 PTGER3P43115 390 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 TBX4P57082 545 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 C2orf80Q0P641 193 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 MLLT11Q13015 90 aaPredicted RBP11.19□□□□□ -0.62
HDAC4-210ENST00000493582 C1DQ13901 141 aaKnown RBP11.19□□□□□ -0.62
HDAC4-210ENST00000493582 RGNQ15493 299 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 TUSC1Q2TAM9 212 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 CLLU1Q5K131 121 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 ATAT1Q5SQI0 421 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 GPR155Q7Z3F1 870 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 ADGRD2Q7Z7M1 963 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 MIB1Q86YT6 1006 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 CPA6Q8N4T0 437 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 BMPERQ8N8U9 685 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 SENP5Q96HI0 755 aaPredicted RBP11.19□□□□□ -0.62
HDAC4-210ENST00000493582 SERPINB11Q96P15 392 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 P2RY12Q9H244 342 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 CLEC4MQ9H2X3 399 aaPredicted RBP11.19□□□□□ -0.62
HDAC4-210ENST00000493582 LATS2Q9NRM7 1088 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 AFF4Q9UHB7 1163 aaKnown RBP11.19□□□□□ -0.62
HDAC4-210ENST00000493582 OARD1Q9Y530 152 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 PCDHB11Q9Y5F2 797 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 QSOX1O00391 747 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 MPZL2O60487 215 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 PRAMEF11O60813 436 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 PAHP00439 452 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 FCER2P06734 321 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 PIPP12273 146 aaPredicted RBP11.19□□□□□ -0.62
HDAC4-210ENST00000493582 CRATP43155 626 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 ZNF91Q05481 1191 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 RBBP4Q09028 425 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 EFEMP1Q12805 493 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 MTAPQ13126 283 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 SF3A2Q15428 464 aaKnown RBP11.19□□□□□ -0.62
HDAC4-210ENST00000493582 IFI44LQ53G44 452 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 OR2G6Q5TZ20 316 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 ADGRG3Q86Y34 549 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 SCN4BQ8IWT1 228 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 CELF5Q8N6W0 485 aaKnown RBP11.19□□□□□ -0.62
HDAC4-210ENST00000493582 PROKR2Q8NFJ6 384 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 ST8SIA2Q92186 375 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 LPPQ93052 612 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 SIPA1Q96FS4 1042 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 MAPKAP1Q9BPZ7 522 aa11.19□□□□□ -0.62
HDAC4-210ENST00000493582 SOSTQ9BQB4 213 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms