RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 CNOT6LQ96LI5 555 aaKnown RBP2.85□□□□□ -1.95
PTCD3-218ENST00000493430 HARBI1Q96MB7 349 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 EDEM2Q9BV94 578 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 BBS2Q9BXC9 721 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 NACA2Q9H009 215 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 CUEDC2Q9H467 287 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 SAMSN1Q9NSI8 373 aaKnown RBP2.85□□□□□ -1.95
PTCD3-218ENST00000493430 ARHGAP26Q9UNA1 814 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 NAALADL1Q9UQQ1 740 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 TRAF3IP3Q9Y228 551 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 MRPS28Q9Y2Q9 187 aaKnown RBP2.85□□□□□ -1.95
PTCD3-218ENST00000493430 MFHAS1Q9Y4C4 1052 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 PKD1L2Q7Z442 2459 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 EPG5Q9HCE0 2579 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 SCN3AQ9NY46 2000 aa2.85□□□□□ -1.95
PTCD3-218ENST00000493430 HEATR5BQ9P2D3 2071 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 CEP295Q9C0D2 2601 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 A0A087X002 238 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 IGHV1OR15-9A0A0B4J2B8 117 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 PVALEFA0A1B0GWK0 134 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 FAM149AA5PLN7 773 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 FAM47DPA6NHR8 397 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 LRRC53A6NM62 1247 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 ANKRD66B4E2M5 251 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 FAM90A26D6RGX4 464 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 GOLGA8SH3BPF8 625 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 H7C423 109 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 K7ERQ8 282 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 ANKRD28O15084 1053 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 PAPSS1O43252 624 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 CALUO43852 315 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 GJB3O75712 270 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 SORBS2O94875 1100 aaKnown RBP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 LETM1O95202 739 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 TSHBP01222 138 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 CISD3P0C7P0 127 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 ZDHHC11BP0C7U3 371 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 EPB41P11171 864 aaKnown RBP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 KRT13P13646 458 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 UGT1A1P22309 533 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 HLA-FP30511 346 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 MAN1A1P33908 653 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 RPS9P46781 194 aaKnown RBP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 CCR3P51677 355 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 MFAP3P55082 362 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 DAOAP59103 153 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 YWHAGP61981 247 aaKnown RBP eCLIP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 SLC7A9P82251 487 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 SPOCK1Q08629 439 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 GOLGA8DPQ0D2H9 430 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 TUBB2AQ13885 445 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 FGFBP1Q14512 234 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 KYAT1Q16773 422 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 COL28A1Q2UY09 1125 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 KIAA1644Q3SXP7 199 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 PTPN20Q4JDL3 420 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 FAM133BQ5BKY9 247 aaKnown RBP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 HECTD3Q5T447 861 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF658Q5TYW1 1059 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 SPINK14Q6IE38 97 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 SUSD1Q6UWL2 747 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 CYP26C1Q6V0L0 522 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 FAM183BPQ6ZVS7 135 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 DPPA4Q7L190 304 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 SLC47A2Q86VL8 602 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 LONP2Q86WA8 852 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 APCDD1Q8J025 514 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 WDTC1Q8N5D0 677 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 EMC1Q8N766 993 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 RBM15BQ8NDT2 890 aaKnown RBP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 FBXL13Q8NEE6 735 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 OR6K2Q8NGY2 324 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 OLIG1Q8TAK6 271 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 DQX1Q8TE96 717 aaKnown RBP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 SLC44A1Q8WWI5 657 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 SYAP1Q96A49 352 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 KLHL29Q96CT2 875 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 SPATA17Q96L03 361 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 SMIM14Q96QK8 99 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 FUZQ9BT04 418 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 TUBB2BQ9BVA1 445 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 GTPBP2Q9BX10 602 aaKnown RBP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 GPR174Q9BXC1 333 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 DUSP16Q9BY84 665 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 GPR88Q9GZN0 384 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 SPHK2Q9NRA0 654 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 ABCB8Q9NUT2 735 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 GPATCH2LQ9NWQ4 482 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 RAB20Q9NX57 234 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 IL37Q9NZH6 218 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 CACNG5Q9UF02 275 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 GMEB2Q9UKD1 530 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 KLK13Q9UKR3 277 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 INTS6Q9UL03 887 aaKnown RBP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 CFAP45Q9UL16 551 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 MMP17Q9ULZ9 603 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 ASB3Q9Y575 518 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 PCDHGB3Q9Y5G1 929 aa2.84□□□□□ -1.95
PTCD3-218ENST00000493430 ZFP37Q9Y6Q3 630 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-218ENST00000493430 ATRXP46100 2492 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms