RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 PAGE2Q7Z2X7 111 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 CPEB2Q7Z5Q1 589 aaKnown RBP13.15□□□□□ -0.3
CCM2-217ENST00000492883 ANKRD37Q7Z713 158 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 CUZD1Q86UP6 607 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 NUDT13Q86X67 352 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 PARP9Q8IXQ6 854 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 ZCCHC7Q8N3Z6 543 aaKnown RBP13.15□□□□□ -0.3
CCM2-217ENST00000492883 EFCAB3Q8N7B9 438 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 EXD3Q8N9H8 876 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 FAM47BQ8NA70 645 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 LSM14AQ8ND56 463 aaKnown RBP13.15□□□□□ -0.3
CCM2-217ENST00000492883 ABHD17AQ96GS6 310 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 PKNOX2Q96KN3 472 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 PAIP2Q9BPZ3 127 aaKnown RBP13.15□□□□□ -0.3
CCM2-217ENST00000492883 MAPKAP1Q9BPZ7 522 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 ADNPQ9H2P0 1102 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 DDX31Q9H8H2 851 aaKnown RBP13.15□□□□□ -0.3
CCM2-217ENST00000492883 ZNF160Q9HCG1 818 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 PRDM9Q9NQV7 894 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 KCMF1Q9P0J7 381 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 VPS29Q9UBQ0 182 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 ANKRD12Q6UB98 2062 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 SPTBP11277 2137 aa13.15□□□□□ -0.3
CCM2-217ENST00000492883 LOC102723996A0A087X1L8 192 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 IGHV1-45A0A0A0MS14 117 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 IGHV3-20A0A0C4DH32 117 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 EIF4E1BA6NMX2 242 aaKnown RBP13.14□□□□□ -0.31
CCM2-217ENST00000492883 CYR61O00622 381 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 BIRC5O15392 142 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 EEDO75530 441 aaKnown RBP13.14□□□□□ -0.31
CCM2-217ENST00000492883 GBAP04062 536 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 KLK1P06870 262 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 UROSP10746 265 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 COX6A1P12074 109 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 HSD3B1P14060 373 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 MAOAP21397 527 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 ITGA3P26006 1051 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 HSD3B2P26439 372 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 TLX1P31314 330 aaPredicted RBP13.14□□□□□ -0.31
CCM2-217ENST00000492883 HTR6P50406 440 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 OR4D2P58180 307 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 CSTF3Q12996 717 aaKnown RBP13.14□□□□□ -0.31
CCM2-217ENST00000492883 MPP2Q14168 576 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 ARL13AQ5H913 290 aaPredicted RBP13.14□□□□□ -0.31
CCM2-217ENST00000492883 CCNYL2Q5T2Q4 361 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 HHATQ5VTY9 493 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 IRAK1BP1Q5VVH5 260 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 PCSK4Q6UW60 755 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 QSOX2Q6ZRP7 698 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 GPR180Q86V85 440 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 ZNF595Q8IYB9 648 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 METTL4Q8N3J2 472 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 GOLGA6L1Q8N7Z2 621 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 GBP7Q8N8V2 638 aaPredicted RBP13.14□□□□□ -0.31
CCM2-217ENST00000492883 TSLPQ969D9 159 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 TLCD1Q96CP7 247 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 CSF3RQ99062 836 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 SLC25A23Q9BV35 468 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 MRPL1Q9BYD6 325 aaKnown RBP13.14□□□□□ -0.31
CCM2-217ENST00000492883 ZNF700Q9H0M5 742 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 MLXIPLQ9NP71 852 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 MS4A12Q9NXJ0 267 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 PHF11Q9UIL8 331 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 TUBD1Q9UJT1 453 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 FIS1Q9Y3D6 152 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 MMACHCQ9Y4U1 282 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 DMXL2Q8TDJ6 3036 aa13.14□□□□□ -0.31
CCM2-217ENST00000492883 A0A0A6YYD5 115 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 TMEM120BA0PK00 339 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 AZIN1O14977 448 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 CHRNGP07510 517 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 FAM58BPP0C7Q3 252 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 ICAM2P13598 275 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 CHN1P15882 459 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 SERPINB5P36952 375 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 BUD31P41223 144 aaPredicted RBP13.13□□□□□ -0.31
CCM2-217ENST00000492883 HSD17B7P56937 341 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 BTKQ06187 659 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 RAPSNQ13702 412 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 CHI3L2Q15782 390 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 IMPG1Q17R60 797 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 SFT2D3Q587I9 215 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 SPDYAQ5MJ70 313 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 AGBL2Q5U5Z8 902 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 CLEC6AQ6EIG7 209 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 GALNT16Q8N428 558 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 TMEM52Q8NDY8 209 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 FDCSPQ8NFU4 85 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 C9orf43Q8TAL5 461 aaPredicted RBP13.13□□□□□ -0.31
CCM2-217ENST00000492883 SLC39A7Q92504 469 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 ARL8AQ96BM9 186 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 TUBB6Q9BUF5 446 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 ZNF717Q9BY31 904 aaPredicted RBP13.13□□□□□ -0.31
CCM2-217ENST00000492883 ACPTQ9BZG2 426 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 VIPAS39Q9H9C1 493 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 TNFRSF12AQ9NP84 129 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 NECTIN3Q9NQS3 549 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 RIC8BQ9NVN3 520 aa13.13□□□□□ -0.31
CCM2-217ENST00000492883 LYARQ9NX58 379 aaKnown RBP13.13□□□□□ -0.31
CCM2-217ENST00000492883 NKIRAS1Q9NYS0 192 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms