RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 DLGAP1O14490 977 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CTDSPLO15194 276 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PFDN6O15212 129 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 TCAPO15273 167 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 EIF1BO60739 113 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 RSL1D1O76021 490 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 OR4F21O95013 312 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 STBD1O95210 358 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 APOL3O95236 402 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 BAG3O95817 575 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SYF2O95926 243 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ALDOAP04075 364 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CRYGBP07316 175 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MELTFP08582 738 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 LINC00614P0C842 121 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 OCMP0CE72 109 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 FCGR2AP12318 317 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ADRB3P13945 408 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF28P17035 718 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF8P17098 575 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 HOXB4P17483 251 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CD33P20138 364 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 DNASE1P24855 282 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ACKR3P25106 362 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ELAVL4P26378 380 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PSMB5P28074 263 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CRHR1P34998 444 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SOX18P35713 384 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 EIF1P41567 113 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 NSFP46459 744 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PGDP52209 483 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 AP2S1P53680 142 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 GALCP54803 685 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CDH13P55290 713 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SLC37A1P57057 533 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 RBX1P62877 108 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ADORA2A-AS1P86434 159 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 EFNB1P98172 346 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MYL7Q01449 175 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MEF2AQ02078 507 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CHRNB3Q05901 458 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 GABPAQ06546 454 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 RAD51Q06609 339 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 FUT7Q11130 342 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ELAVL3Q14576 367 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ITIH4Q14624 930 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 NR1I3Q14994 352 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 EMC2Q15006 297 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 IRF4Q15306 451 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PHKG1Q16816 387 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ADPRMQ3LIE5 342 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 C5orf47Q569G3 176 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CMPK2Q5EBM0 449 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PXDC1Q5TGL8 231 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ABHD17BQ5VST6 288 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 HACD4Q5VWC8 232 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PRAMEF13Q5VWM6 474 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 TCEAL6Q6IPX3 200 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 VN1R5Q7Z5H4 357 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SETD3Q86TU7 594 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SLC26A11Q86WA9 606 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF100Q8IYN0 542 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SHISA5Q8N114 240 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 STK40Q8N2I9 435 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 TMEM151AQ8N4L1 468 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 DNAJC5GQ8N7S2 189 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 KYQ8NBH2 561 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 TMEM35BQ8NCS4 154 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 FAM83FQ8NEG4 500 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 MARCH1Q8TCQ1 289 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 HM13Q8TCT9 377 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SH3RF2Q8TEC5 729 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CA5BP1Q8WTZ4 195 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 FAM222BQ8WU58 562 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CHPT1Q8WUD6 406 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 FBLIM1Q8WUP2 373 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SMPDL3BQ92485 455 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SLC38A4Q969I6 547 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ABTB1Q969K4 478 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 UTP4Q969X6 686 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 FUBP1Q96AE4 644 aaKnown RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SLCO4A1Q96BD0 722 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SPSB1Q96BD6 273 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 LENG1Q96BZ8 264 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 HAUS1Q96CS2 278 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CMTM5Q96DZ9 223 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 SGTBQ96EQ0 304 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 TCTN2Q96GX1 697 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 GLT1D1Q96MS3 346 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 PPP1R2P1Q96PQ5 205 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 RAB40CQ96S21 281 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CCT8L2Q96SF2 557 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ZIC5Q96T25 663 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CD180Q99467 661 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 JAM3Q9BX67 310 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ZNF717Q9BY31 904 aaPredicted RBP4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CLPBQ9H078 707 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 GANQ9H2C0 597 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 CRISPLD1Q9H336 500 aa4.02□□□□□ -1.77
BRCA1-220ENST00000492859 ZCCHC4Q9H5U6 513 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms