RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 FAM174BQ3ZCQ3 159 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 FAM109BQ6ICB4 259 aaPredicted RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 RGMBQ6NW40 437 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 SCIMPQ6UWF3 145 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 PROKR2Q8NFJ6 384 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 SPATA22Q8NHS9 363 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 RAD51AP1Q96B01 352 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 LRRC46Q96FV0 321 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 TREX2Q9BQ50 279 aaPredicted RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 EVA1AQ9H8M9 152 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 ZNF408Q9H9D4 720 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 JPH1Q9HDC5 661 aaPredicted RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 TMPRSS4Q9NRS4 437 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 CLN6Q9NWW5 311 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 IMPAD1Q9NX62 359 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 FBXL2Q9UKC9 423 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 ERVK-19Q9WJR5 959 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 CCL27Q9Y4X3 112 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 NUP205Q92621 2012 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 A0A0U1RQF3 1178 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 YDJCA8MPS7 323 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 SUPT3HB4E1H0 165 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 WRBO00258 174 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 GABRDO14764 452 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 SGCEO43556 437 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 EIF3GO75821 320 aaKnown RBP eCLIP9.3□□□□□ -0.92
VPS8-225ENST00000492449 HRGP04196 525 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 HAPLN1P10915 354 aaPredicted RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 PTPN6P29350 595 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 BDKRB1P46663 353 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 IDH2P48735 452 aaKnown RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 STARP49675 285 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 RPL6Q02878 288 aaKnown RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 TCP10Q12799 353 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 MAD2L1Q13257 205 aaPredicted RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 FGL2Q14314 439 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 SWI5Q1ZZU3 235 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 SLC25A25Q6KCM7 469 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 AFTPHQ6ULP2 937 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 FAM217AQ8IXS0 508 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 FTMTQ8N4E7 242 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 NANPQ8TBE9 248 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 ACER1Q8TDN7 264 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 NUDT8Q8WV74 236 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 RPF1Q9H9Y2 349 aaKnown RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 GLOD4Q9HC38 313 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 SERHLQ9NQF3 203 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 SLC6A13Q9NSD5 602 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 SPATA2Q9UM82 520 aa9.3□□□□□ -0.92
VPS8-225ENST00000492449 EXO1Q9UQ84 846 aaKnown RBP9.3□□□□□ -0.92
VPS8-225ENST00000492449 TCRBV16S1A1N1A0A5B0 115 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 LCHNA4D1U4 455 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 FAM72CH0Y354 149 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 J3KR12 359 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 SLC19A2O60779 497 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 HIST1H2AGP0C0S8 130 aaPredicted RBP9.29□□□□□ -0.92
VPS8-225ENST00000492449 PEPDP12955 493 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 HIST1H2ADP20671 130 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 HNMTP50135 292 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 GPR143P51810 404 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 PRMT2P55345 433 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 TPI1P60174 286 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 PLIN5Q00G26 463 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 TARBP2Q15633 366 aaKnown RBP9.29□□□□□ -0.92
VPS8-225ENST00000492449 TMEM201Q5SNT2 666 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 FAM72AQ5TYM5 149 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 HIST2H2AA3Q6FI13 130 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 ELP2Q6IA86 826 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 FAM72DQ6L9T8 149 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 FAM72BQ86X60 149 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 DEFB106AQ8N104 65 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 PIAS4Q8N2W9 510 aaPredicted RBP9.29□□□□□ -0.92
VPS8-225ENST00000492449 ARL6IP6Q8N6S5 226 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 OR4C15Q8NGM1 316 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 OR1S1Q8NH92 325 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 HSH2DQ96JZ2 352 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 HIST1H2AHQ96KK5 128 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 FAM193BQ96PV7 902 aaPredicted RBP9.29□□□□□ -0.92
VPS8-225ENST00000492449 ZIC5Q96T25 663 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 NELL2Q99435 816 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 FEVQ99581 238 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 PKMYT1Q99640 499 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 HIST1H2AJQ99878 128 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 MRPL45Q9BRJ2 306 aaKnown RBP9.29□□□□□ -0.92
VPS8-225ENST00000492449 SORBS1Q9BX66 1292 aaKnown RBP9.29□□□□□ -0.92
VPS8-225ENST00000492449 TMPRSS13Q9BYE2 586 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 SEMA4CQ9C0C4 833 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 ABHD16BQ9H3Z7 469 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 PPIEQ9UNP9 301 aaKnown RBP9.29□□□□□ -0.92
VPS8-225ENST00000492449 LOC285556D6RIA3 1793 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 PLSCR5A0PG75 271 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 ADAMDEC1O15204 470 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 ECI2O75521 394 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 SOX30O94993 753 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 GLP2RO95838 553 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 MT-CYBP00156 380 aaPredicted RBP9.29□□□□□ -0.92
VPS8-225ENST00000492449 APOC3P02656 99 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 CXCL8P10145 99 aa9.29□□□□□ -0.92
VPS8-225ENST00000492449 FGF9P31371 208 aaPredicted RBP9.29□□□□□ -0.92
VPS8-225ENST00000492449 KDELR2P33947 212 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms