RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 LRRC69Q6ZNQ3 347 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 KMT5CQ86Y97 462 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 ADGRG5Q8IZF4 528 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 ZBTB8BQ8NAP8 495 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-219ENST00000491747 ANKRD49Q8WVL7 239 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 LRRC58Q96CX6 371 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 COX4I2Q96KJ9 171 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 C3orf30Q96M34 536 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 FOPNLQ96NB1 174 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 PKP4Q99569 1192 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 TRIM54Q9BYV2 358 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 ASPSCR1Q9BZE9 553 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 DPH1Q9BZG8 443 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 PALMDQ9NP74 551 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 TAS2R13Q9NYV9 303 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 TRMT6Q9UJA5 497 aaKnown RBP8.97□□□□□ -0.97
BRCA1-219ENST00000491747 PILRAQ9UKJ1 303 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 IKZF3Q9UKT9 509 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 DNAJC15Q9Y5T4 150 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 PKD1L2Q7Z442 2459 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 FXYD1O00168 92 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 EI24O14681 340 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 ARPC2O15144 300 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 CTSBP07858 339 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 CBSLP0DN79 551 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 LIPCP11150 499 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 UMPSP11172 480 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 GFAPP14136 432 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 CAPN3P20807 821 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 SLC6A2P23975 617 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 CBSP35520 551 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 CBX3Q13185 183 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 UGT3A2Q3SY77 523 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 PRAMEF17Q5VTA0 474 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 ISCA2Q86U28 154 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 VASH2Q86V25 355 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 DDIASQ8IXT1 998 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 CARFQ8N187 725 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 OR9A1PQ8NGU1 263 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 FAM110BQ8TC76 370 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 TSPEARQ8WU66 669 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 TWIST2Q8WVJ9 160 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 NKD1Q969G9 470 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 ZNF501Q96CX3 271 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-219ENST00000491747 CPNE5Q9HCH3 593 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 SDR39U1Q9NRG7 319 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-219ENST00000491747 FGF21Q9NSA1 209 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 SOHLH2Q9NX45 425 aa8.97□□□□□ -0.97
BRCA1-219ENST00000491747 GMPR2Q9P2T1 348 aaKnown RBP8.97□□□□□ -0.97
BRCA1-219ENST00000491747 SPTBP11277 2137 aa8.96□□□□□ -0.97
BRCA1-219ENST00000491747 A0A1W2PPW3 197 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 TRIM64BA6NI03 449 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 AZIN1O14977 448 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 ACOX3O15254 700 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 STK17BO94768 372 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 DLGAP3O95886 979 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 ERGP11308 486 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 IDO1P14902 403 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 LBPP18428 481 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 TSPAN8P19075 237 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 WT1P19544 449 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-219ENST00000491747 GABRA4P48169 554 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 ARL4DP49703 201 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 COL9A2Q14055 689 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-219ENST00000491747 IL11RAQ14626 422 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 KIR2DS3Q14952 304 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 SLC5A12Q1EHB4 618 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 UNC50Q53HI1 259 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 CCNYL2Q5T2Q4 361 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 PWWP2BQ6NUJ5 590 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 UGT3A1Q6NUS8 523 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 TTC23LQ6PF05 361 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 KCTD8Q6ZWB6 473 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 TBC1D15Q8TC07 691 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 FBXL20Q96IG2 436 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 TEFMQ96QE5 360 aaKnown RBP8.96□□□□□ -0.98
BRCA1-219ENST00000491747 ALG2Q9H553 416 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 CMTM6Q9NX76 183 aa8.96□□□□□ -0.98
BRCA1-219ENST00000491747 TMEM184BQ9Y519 407 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-219ENST00000491747 A0A0J9YY10 115 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 STMND1H3BQB6 276 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 PIP5K1BO14986 540 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 KDM1AO60341 852 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 VPS4BO75351 444 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 CLIC3O95833 236 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 LDLRP01130 860 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 VARSP26640 1264 aaKnown RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 CD82P27701 267 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 HLCSP50747 726 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 CDH13P55290 713 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 CAPRIN1Q14444 709 aaKnown RBP8.95□□□□□ -0.98
BRCA1-219ENST00000491747 MOGQ16653 247 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 CYP2A13Q16696 494 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 CYBRD1Q53TN4 286 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 FGD3Q5JSP0 725 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 KIAA1614Q5VZ46 1190 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 FCRL6Q6DN72 434 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 C16orf87Q6PH81 154 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 SUSD1Q6UWL2 747 aa8.95□□□□□ -0.98
BRCA1-219ENST00000491747 UBE2R2Q712K3 238 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms