RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 EMP2P54851 167 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 RHAGQ02094 409 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 BST1Q10588 318 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 SPIN4Q56A73 249 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 SGO1Q5FBB7 561 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 ATG16L1Q676U5 607 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 CLEC6AQ6EIG7 209 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 PPP1R32Q7Z5V6 425 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 ZNF595Q8IYB9 648 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 FAM76AQ8TAV0 307 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 MRPL1Q9BYD6 325 aaKnown RBP16.44■□□□□ 0.22
ERCC3-207ENST00000490062 VN1R1Q9GZP7 353 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 ILKAPQ9H0C8 392 aaPredicted RBP16.44■□□□□ 0.22
ERCC3-207ENST00000490062 TUBB1Q9H4B7 451 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 SOX17Q9H6I2 414 aaPredicted RBP16.44■□□□□ 0.22
ERCC3-207ENST00000490062 THAP1Q9NVV9 213 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 ZDHHC2Q9UIJ5 367 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 PHF11Q9UIL8 331 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 C3orf18Q9UK00 162 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 POLHQ9Y253 713 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 ASB4Q9Y574 426 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 HS3ST3B1Q9Y662 390 aa16.44■□□□□ 0.22
ERCC3-207ENST00000490062 IGKV3D-11A0A0A0MRZ8 115 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 PSMD12O00232 456 aaPredicted RBP16.43■□□□□ 0.22
ERCC3-207ENST00000490062 SLC28A1O00337 649 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 SAP18O00422 153 aaKnown RBP16.43■□□□□ 0.22
ERCC3-207ENST00000490062 EEDO75530 441 aaKnown RBP16.43■□□□□ 0.22
ERCC3-207ENST00000490062 JRKO75564 520 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 HSPA4LO95757 839 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 ITGB2P05107 769 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 FURINP09958 794 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 CHN1P15882 459 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 TPP2P29144 1249 aaPredicted RBP16.43■□□□□ 0.22
ERCC3-207ENST00000490062 SERPINB3P29508 390 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 GSTM5P46439 218 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 HSD17B7P56937 341 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 TRA2BP62995 288 aaKnown RBP16.43■□□□□ 0.22
ERCC3-207ENST00000490062 OLR1P78380 273 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 ERV3-1Q14264 604 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 XKR7Q5GH72 579 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 SH2D4BQ5SQS7 431 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 FAM219BQ5XKK7 198 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 Q6ZSR9 355 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 COMMD6Q7Z4G1 85 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 MRGPREQ86SM8 312 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 APLFQ8IW19 511 aaPredicted RBP16.43■□□□□ 0.22
ERCC3-207ENST00000490062 TMEM151BQ8IW70 566 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 SCUBE1Q8IWY4 988 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 SHISA5Q8N114 240 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 MGARPQ8TDB4 240 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 VPS50Q96JG6 964 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 HBEGFQ99075 208 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 PAIP2Q9BPZ3 127 aaKnown RBP16.43■□□□□ 0.22
ERCC3-207ENST00000490062 SHCBP1LQ9BZQ2 653 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 MANSC1Q9H8J5 431 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 MCM8Q9UJA3 840 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 MKL2Q9ULH7 1088 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 MRPS33Q9Y291 106 aaKnown RBP16.43■□□□□ 0.22
ERCC3-207ENST00000490062 CLDN16Q9Y5I7 305 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 SPACA6W5XKT8 324 aa16.43■□□□□ 0.22
ERCC3-207ENST00000490062 SOCS6O14544 535 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 TMPRSS11DO60235 418 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 ALOX12BO75342 701 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 SH3BGRLO75368 114 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 LYPLA1O75608 230 aaPredicted RBP16.42■□□□□ 0.22
ERCC3-207ENST00000490062 HEXBP07686 556 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 NR1D1P20393 614 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 CXADRP78310 365 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 OCRLQ01968 901 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 SLAMF1Q13291 335 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 KIAA0040Q15053 153 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 FAM69BQ5VUD6 431 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 GPR155Q7Z3F1 870 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 GPR180Q86V85 440 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 TWIST2Q8WVJ9 160 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 FCRL1Q96LA6 429 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 MAPKAP1Q9BPZ7 522 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 YIPF2Q9BWQ6 316 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 SORBS1Q9BX66 1292 aaKnown RBP16.42■□□□□ 0.22
ERCC3-207ENST00000490062 PFDN4Q9NQP4 134 aa16.42■□□□□ 0.22
ERCC3-207ENST00000490062 CACNA1GO43497 2377 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 CLDN4O14493 209 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 PROM1O43490 865 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 RGS14O43566 566 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 FAM58BPP0C7Q3 252 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 ACPPP15309 386 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 RPL14P50914 215 aaKnown RBP16.41■□□□□ 0.22
ERCC3-207ENST00000490062 HNRNPH2P55795 449 aaKnown RBP16.41■□□□□ 0.22
ERCC3-207ENST00000490062 FOXL2P58012 376 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 HMGCS1Q01581 520 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 TNFRSF17Q02223 184 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 ACSM2AQ08AH3 577 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 ACSM2BQ68CK6 577 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 KIRREL2Q6UWL6 708 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 RGS9BPQ6ZS82 235 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 LRRC34Q8IZ02 419 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 C1orf52Q8N6N3 182 aaKnown RBP16.41■□□□□ 0.22
ERCC3-207ENST00000490062 ZNF781Q8N8C0 355 aa16.41■□□□□ 0.22
ERCC3-207ENST00000490062 TMEM102Q8N9M5 508 aaPredicted RBP16.41■□□□□ 0.22
ERCC3-207ENST00000490062 ZNF75CPQ92670 426 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms