RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 A0A0G2JN53 185 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 ATP6AP2A0A1C7CYW4 349 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 ATP6AP2O75787 350 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 GUCA1CO95843 209 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 FGGP02679 453 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 SERPINA6P08185 405 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 DNASE1L1P49184 302 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 HNRNPFP52597 415 aaKnown RBP12.93□□□□□ -0.34
VARS-227ENST00000489979 CDKN2DP55273 166 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 AP1S2P56377 157 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 BTN3A2P78410 334 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 SLC13A2Q13183 592 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 BMPR2Q13873 1038 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 RUNX2Q13950 521 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 SLC10A1Q14973 349 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 RBM20Q5T481 1227 aaKnown RBP12.93□□□□□ -0.34
VARS-227ENST00000489979 WLSQ5T9L3 541 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 RIPPLY2Q5TAB7 128 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 PAMR1Q6UXH9 720 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 RTL4Q6ZR62 310 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 FAM47EQ6ZV65 393 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 CAMKMTQ7Z624 323 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 BIVMQ86UB2 503 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 AGGF1Q8N302 714 aaeCLIP12.93□□□□□ -0.34
VARS-227ENST00000489979 WFDC11Q8NEX6 87 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 SARAFQ96BY9 339 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 SERPINB12Q96P63 405 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 AIF1LQ9BQI0 150 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 FAM167BQ9BTA0 163 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 LDAHQ9H6V9 325 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 PELI2Q9HAT8 420 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 ADAP2Q9NPF8 381 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 DMRT3Q9NQL9 472 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 B4GALT7Q9UBV7 327 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 GUCA1BQ9UMX6 200 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 DYRK1BQ9Y463 629 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 MAD1L1Q9Y6D9 718 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 FBN3Q75N90 2809 aa12.93□□□□□ -0.34
VARS-227ENST00000489979 NSD1Q96L73 2696 aaPredicted RBP12.92□□□□□ -0.34
VARS-227ENST00000489979 FAM47E-STBD1D6RA91 191 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 SYT5O00445 386 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 CLDN4O14493 209 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 SUSD5O60279 629 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 SAT1P21673 171 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 PEX19P40855 299 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 HK2P52789 917 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 HSD17B7P56937 341 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 CCZ1BP86790 482 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 CCZ1P86791 482 aaPredicted RBP12.92□□□□□ -0.34
VARS-227ENST00000489979 FOXO1Q12778 655 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 FLYWCH1Q4VC44 716 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 NXPE4Q6UWF7 544 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 HSDL2Q6YN16 418 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 CLNKQ7Z7G1 428 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 TMPRSS11BQ86T26 416 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 TMEM132CQ8N3T6 1108 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 C2CD4AQ8NCU7 369 aaPredicted RBP12.92□□□□□ -0.34
VARS-227ENST00000489979 MCUQ8NE86 351 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 FAM222BQ8WU58 562 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 MAIP1Q8WWC4 291 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 ATL1Q8WXF7 558 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 FAR2Q96K12 515 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 TRIM54Q9BYV2 358 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 EXO5Q9H790 373 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 XAB2Q9HCS7 855 aaKnown RBP12.92□□□□□ -0.34
VARS-227ENST00000489979 SEMA4BQ9NPR2 832 aaPredicted RBP12.92□□□□□ -0.34
VARS-227ENST00000489979 TUBA8Q9NY65 449 aaPredicted RBP12.92□□□□□ -0.34
VARS-227ENST00000489979 SPRR3Q9UBC9 169 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 CBLCQ9ULV8 474 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 CLCA3PQ9Y6N3 262 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 NCKAP5O14513 1909 aa12.92□□□□□ -0.34
VARS-227ENST00000489979 TRGV5A0A0B4J1U4 118 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 MYOCOSA0A1B0GUC4 107 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 NRDCO43847 1150 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 ZNF354AO60765 605 aaPredicted RBP12.91□□□□□ -0.34
VARS-227ENST00000489979 KRT14P02533 472 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 RAF1P04049 648 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 P04436 131 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 IFNA16P05015 189 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 CCL3P10147 92 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 GABRA1P14867 456 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 ENDOUP21128 410 aaKnown RBP12.91□□□□□ -0.34
VARS-227ENST00000489979 GABRB3P28472 473 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 PGGT1BP53609 377 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 RAB38P57729 211 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 IL2P60568 153 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 STXBP1P61764 594 aaKnown RBP12.91□□□□□ -0.34
VARS-227ENST00000489979 ELAVL1Q15717 326 aaKnown RBP12.91□□□□□ -0.34
VARS-227ENST00000489979 HYAL4Q2M3T9 481 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 DEFB113Q30KQ7 82 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 THOC6Q86W42 341 aaKnown RBP12.91□□□□□ -0.34
VARS-227ENST00000489979 ZNF321PQ8N8H1 164 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 FAM47BQ8NA70 645 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 GOLM1Q8NBJ4 401 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 RELL2Q8NC24 303 aaPredicted RBP12.91□□□□□ -0.34
VARS-227ENST00000489979 GAL3ST3Q96A11 431 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 SIGLEC10Q96LC7 697 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 SGCZQ96LD1 299 aa12.91□□□□□ -0.34
VARS-227ENST00000489979 NPLQ9BXD5 320 aaPredicted RBP12.91□□□□□ -0.34
VARS-227ENST00000489979 SACM1LQ9NTJ5 587 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms