RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 RNF187Q5TA31 235 aaPredicted RBP8.43□□□□□ -1.06
SSBP1-212ENST00000489378 THEMIS2Q5TEJ8 643 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 NSUN5P2Q63ZY6 315 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 BBS12Q6ZW61 710 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 SYT9Q86SS6 491 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 LUZP2Q86TE4 346 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 CDKL3Q8IVW4 592 aaPredicted RBP8.43□□□□□ -1.06
SSBP1-212ENST00000489378 NEIL3Q8TAT5 605 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 ACTL9Q8TC94 416 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 LRRC45Q96CN5 670 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 HSPBAP1Q96EW2 488 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 PDLIM2Q96JY6 352 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 PANX3Q96QZ0 392 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 CCDC77Q9BR77 488 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 PLA2G12AQ9BZM1 189 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 LRRC40Q9H9A6 602 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 PNO1Q9NRX1 252 aaKnown RBP8.43□□□□□ -1.06
SSBP1-212ENST00000489378 SACM1LQ9NTJ5 587 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 SPTLC3Q9NUV7 552 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 ZNF701Q9NV72 531 aaPredicted RBP8.43□□□□□ -1.06
SSBP1-212ENST00000489378 TMEM184CQ9NVA4 438 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 ZFATQ9P243 1243 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 MYOTQ9UBF9 498 aa8.43□□□□□ -1.06
SSBP1-212ENST00000489378 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.43□□□□□ -1.06
SSBP1-212ENST00000489378 PKD1L1Q8TDX9 2849 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 C15orf38-AP3S2A0A0A6YYH1 394 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 LRRC3CA6NJW4 275 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 A8MV72 311 aaPredicted RBP8.42□□□□□ -1.06
SSBP1-212ENST00000489378 APOC4-APOC2K7ER74 178 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 KPNA5O15131 536 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 SPOPO43791 374 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 PSIP1O75475 530 aaKnown RBP8.42□□□□□ -1.06
SSBP1-212ENST00000489378 STK10O94804 968 aaKnown RBP8.42□□□□□ -1.06
SSBP1-212ENST00000489378 IL18BPO95998 194 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 APOC2P02655 101 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 HSD17B2P37059 387 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 MARCKSL1P49006 195 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 ATP5J2P56134 94 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 CRYZQ08257 329 aaKnown RBP8.42□□□□□ -1.06
SSBP1-212ENST00000489378 FOXF2Q12947 444 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 VEZF1Q14119 521 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 KCNJ11Q14654 390 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 ACSBG2Q5FVE4 666 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 WIPI1Q5MNZ9 446 aaPredicted RBP8.42□□□□□ -1.06
SSBP1-212ENST00000489378 HECTD2Q5U5R9 776 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 CAPN13Q6MZZ7 669 aaPredicted RBP8.42□□□□□ -1.06
SSBP1-212ENST00000489378 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.42□□□□□ -1.06
SSBP1-212ENST00000489378 C9orf106Q8NAJ2 232 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 GOLM1Q8NBJ4 401 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 OR52K1Q8NGK4 314 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 MRFAP1L1Q96HT8 127 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 PPP1R2P1Q96PQ5 205 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 SLC30A3Q99726 388 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 FERMT1Q9BQL6 677 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 REG4Q9BYZ8 158 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 AMBRA1Q9C0C7 1298 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 RHBGQ9H310 441 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 ACKR4Q9NPB9 350 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 SAMD15Q9P1V8 674 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 GALPQ9UBC7 116 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 WIF1Q9Y5W5 379 aa8.42□□□□□ -1.06
SSBP1-212ENST00000489378 MACROD2A1Z1Q3 448 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 MBD3L3A6NE82 208 aaPredicted RBP8.41□□□□□ -1.06
SSBP1-212ENST00000489378 ZNF839A8K0R7 811 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 TGFBR3LH3BV60 316 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 NIPSNAP2O75323 286 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 ERN1O75460 977 aaKnown RBP8.41□□□□□ -1.06
SSBP1-212ENST00000489378 SYF2O95926 243 aaKnown RBP8.41□□□□□ -1.06
SSBP1-212ENST00000489378 P04436 131 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 SLC35G6P0C7Q6 338 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 ZNF888P0CJ79 500 aaPredicted RBP8.41□□□□□ -1.06
SSBP1-212ENST00000489378 RBP3P10745 1247 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 ALOX12P18054 663 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 PPARGP37231 505 aaPredicted RBP8.41□□□□□ -1.06
SSBP1-212ENST00000489378 SLC1A1P43005 524 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 CPA2P48052 419 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 HK2P52789 917 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 EIF3BP55884 814 aaKnown RBP8.41□□□□□ -1.06
SSBP1-212ENST00000489378 EIF3EP60228 445 aaKnown RBP8.41□□□□□ -1.06
SSBP1-212ENST00000489378 ACVR1Q04771 509 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 DUSP8Q13202 625 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 TERF2Q15554 542 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 CLEC12BQ2HXU8 276 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 PARP6Q2NL67 630 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 KLHL38Q2WGJ6 581 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 TBCELQ5QJ74 424 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 DARS2Q6PI48 645 aaKnown RBP8.41□□□□□ -1.06
SSBP1-212ENST00000489378 LRRC25Q8N386 305 aaPredicted RBP8.41□□□□□ -1.06
SSBP1-212ENST00000489378 LIX1Q8N485 282 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 MBD3L2Q8NHZ7 208 aaPredicted RBP8.41□□□□□ -1.06
SSBP1-212ENST00000489378 SGCZQ96LD1 299 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 WFIKKN1Q96NZ8 548 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 TRIB1Q96RU8 372 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 TIMP4Q99727 224 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 GOLPH3Q9H4A6 298 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 FAM114A2Q9NRY5 505 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 CATSPERZQ9NTU4 200 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 ANO10Q9NW15 660 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 KLHL28Q9NXS3 571 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 NDRG3Q9UGV2 375 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms