RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 LHFPL3Q86UP9 236 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 GATSQ8NAP1 163 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 TUBA1CQ9BQE3 449 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 ZNF471Q9BX82 626 aaPredicted RBP16.95■□□□□ 0.3
NPHP4-209ENST00000489180 AIG1Q9NVV5 245 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 SARDHQ9UL12 918 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 SH2B3Q9UQQ2 575 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 OARD1Q9Y530 152 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 LRRN3E7EW58 273 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 FLRT2O43155 660 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 TSPAN6O43657 245 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 RPS26P62854 115 aaKnown RBP16.95■□□□□ 0.3
NPHP4-209ENST00000489180 VMACQ2NL98 169 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 FAM76BQ5HYJ3 339 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 C1orf220Q5T0J3 134 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 C1orf94Q6P1W5 598 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 DCUN1D3Q8IWE4 304 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 SCML4Q8N228 414 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 MFSD2AQ8NA29 543 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 NEIL3Q8TAT5 605 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 SGCDQ92629 289 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 RFT1Q96AA3 541 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 OTUB2Q96DC9 234 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 C11orf84Q9BUA3 381 aaPredicted RBP16.95■□□□□ 0.3
NPHP4-209ENST00000489180 LRRN3Q9H3W5 708 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 FAM118AQ9NWS6 357 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 ERVK13-1Q9NX77 482 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 SPEF2Q9C093 1822 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 GPR89AB7ZAQ6 455 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 GPR89BP0CG08 455 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 TYRP1P17643 537 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 GADD45AP24522 165 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 NIPAL4Q0D2K0 466 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 ZNF423Q2M1K9 1284 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 AKAP1Q92667 903 aaKnown RBP eCLIP16.95■□□□□ 0.3
NPHP4-209ENST00000489180 SLC45A3Q96JT2 553 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 INSL5Q9Y5Q6 135 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 S100A2P29034 98 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 SIX1Q15475 284 aaPredicted RBP16.95■□□□□ 0.3
NPHP4-209ENST00000489180 SLC25A25Q6KCM7 469 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 DENND1AQ8TEH3 1009 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 PIP5K1AQ99755 562 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 ZNF487B1APH4 448 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 TLE2Q04725 743 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 GRASPQ7Z6J2 395 aaPredicted RBP16.95■□□□□ 0.3
NPHP4-209ENST00000489180 DEFB119Q8N690 84 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 RDH12Q96NR8 316 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 CDH10Q9Y6N8 788 aa16.95■□□□□ 0.3
NPHP4-209ENST00000489180 TEX13DA0A0J9YY54 714 aaPredicted RBP16.94■□□□□ 0.3
NPHP4-209ENST00000489180 CD8B2A6NJW9 211 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 KIAA0513O60268 411 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 ZNF821O75541 412 aaPredicted RBP16.94■□□□□ 0.3
NPHP4-209ENST00000489180 CD8BP10966 210 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 ACRV1P26436 265 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 FXYD6P3P58550 94 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 OC90Q02509 493 aaPredicted RBP16.94■□□□□ 0.3
NPHP4-209ENST00000489180 SOX4Q06945 474 aaPredicted RBP16.94■□□□□ 0.3
NPHP4-209ENST00000489180 CTC1Q2NKJ3 1217 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 GXYLT1Q4G148 440 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 PIGGQ5H8A4 983 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 DNM1P34Q6PK57 102 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 ZFAND4Q86XD8 727 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 TMEM151AQ8N4L1 468 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 CELF5Q8N6W0 485 aaKnown RBP16.94■□□□□ 0.3
NPHP4-209ENST00000489180 GALNT11Q8NCW6 608 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 OR6N2Q8NGY6 317 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 C15orf40Q8WUR7 153 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 DLG5Q8TDM6 1919 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 TRIM64CA6NLI5 447 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 GRID2O43424 1007 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 GNAO1P09471 354 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 KCNC4Q03721 635 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 PLEKHS1Q5SXH7 462 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 NCCRP1Q6ZVX7 275 aaPredicted RBP16.94■□□□□ 0.3
NPHP4-209ENST00000489180 IFNL1Q8IU54 200 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 DOK4Q8TEW6 326 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 SLC2A13Q96QE2 648 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 MTMR10Q9NXD2 777 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 MAFKO60675 156 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 SLC19A2O60779 497 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 LEFTY1O75610 366 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 LY6G5CQ5SRR4 150 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 C1orf74Q96LT6 269 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 ORAI3Q9BRQ5 295 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 UBR1Q8IWV7 1749 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 M0R233 179 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 CDC123O75794 336 aaPredicted RBP16.94■□□□□ 0.3
NPHP4-209ENST00000489180 TAS2R43P59537 309 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 E2F1Q01094 437 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 FBXO27Q8NI29 283 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 LGALS12Q96DT0 336 aa16.94■□□□□ 0.3
NPHP4-209ENST00000489180 FAM208AQ9UK61 1670 aaKnown RBP16.94■□□□□ 0.3
NPHP4-209ENST00000489180 PRSS56P0CW18 603 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 EPCAMP16422 314 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 POLR2CP19387 275 aaPredicted RBP16.93■□□□□ 0.3
NPHP4-209ENST00000489180 GHRHRQ02643 423 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 KCNC3Q14003 757 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 CLCA4Q14CN2 919 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 PRRT3Q5FWE3 981 aa16.93■□□□□ 0.3
NPHP4-209ENST00000489180 ZFP41Q8N8Y5 198 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms