RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 DAPP1Q9UN19 280 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 MRPS33Q9Y291 106 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 CLDN16Q9Y5I7 305 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 NOTCH2Q04721 2471 aa11.14□□□□□ -0.63
CCHCR1-215ENST00000488920 SVILO95425 2214 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 TEX15Q9BXT5 2789 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 SCN2AQ99250 2005 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 A0A087X1B8 175 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 K7EPI3 171 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 SAP18O00422 153 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 RTCAO00442 366 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 ZNHIT1O43257 154 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 NME2P1O60361 137 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 SLC19A2O60779 497 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 CTNSO60931 367 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 TGFB1P01137 390 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 IFNA16P05015 189 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 C2P06681 752 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 MTHFD2P13995 350 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 NME2P22392 152 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 ATP5A1P25705 553 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 TRHRP34981 398 aaPredicted RBP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 CA7P43166 264 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 GPR143P51810 404 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 CASP6P55212 293 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 KRTCAP3Q53RY4 240 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 RNFT1Q5M7Z0 435 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 SP5Q6BEB4 398 aaPredicted RBP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 MED27Q6P2C8 311 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 ZNF793Q6ZN11 406 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 C16orf47Q6ZP98 133 aaPredicted RBP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 CENPLQ8N0S6 344 aaPredicted RBP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 RNF175Q8N4F7 328 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 TEX9Q8N6V9 391 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 ACOT4Q8N9L9 421 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 FAM98AQ8NCA5 519 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 OR7G3Q8NG95 312 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 ADAMTS18Q8TE60 1221 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 ZNF473Q8WTR7 871 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 UBE2E3Q969T4 207 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 TMEM125Q96AQ2 219 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 VMP1Q96GC9 406 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 C16orf45Q96MC5 204 aaPredicted RBP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 GPR137Q96N19 417 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 MAPKAP1Q9BPZ7 522 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 TBCDQ9BTW9 1192 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 MS4A8Q9BY19 250 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 ALOXE3Q9BYJ1 711 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 TRIM45Q9H8W5 580 aaPredicted RBP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 LIN28AQ9H9Z2 209 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 LYRM4Q9HD34 91 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 SNX15Q9NRS6 342 aa11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 SUCOQ9UBS9 1254 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 PPIEQ9UNP9 301 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-215ENST00000488920 CPAMD8Q8IZJ3 1885 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 CELSR2Q9HCU4 2923 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 A0A096LPK6 155 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 LRRC14BA6NHZ5 514 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 SYCE1LA8MT33 242 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 PRSS44E7EML9 344 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 CDK2AP1O14519 115 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 ASNA1O43681 348 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 PRKNO60260 465 aaPredicted RBP11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 LDB3O75112 727 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 ITGA10O75578 1167 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 ZFAND5O76080 213 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 MLYCDO95822 493 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 EPB42P16452 691 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 TNNI3P19429 210 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 ID2Q02363 134 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 STX4Q12846 297 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 DDX39BQ13838 428 aaKnown RBP11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 E2F2Q14209 437 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 RCN2Q14257 317 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 TERF2Q15554 542 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 C3AR1Q16581 482 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 PFKFB4Q16877 469 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 FAM83EQ2M2I3 478 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 AP5B1Q2VPB7 878 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 TMEM35AQ53FP2 167 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 CHSY3Q70JA7 882 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 MYLK4Q86YV6 388 aaPredicted RBP11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 SPPL2CQ8IUH8 684 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 SIAH3Q8IW03 269 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 LAS2Q8IYD9 372 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 ARMC10Q8N2F6 343 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 TMEM132CQ8N3T6 1108 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 TMEM156Q8N614 296 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 CPSF7Q8N684 471 aaKnown RBP11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 SRFBP1Q8NEF9 429 aaKnown RBP11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 PTPMT1Q8WUK0 201 aaPredicted RBP11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 UBTD2Q8WUN7 234 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 ITLN2Q8WWU7 325 aaPredicted RBP11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 ZNF592Q92610 1267 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 CCDC120Q96HB5 630 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 MAGED4Q96JG8 741 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 CCDC77Q9BR77 488 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 SORBS1Q9BX66 1292 aaKnown RBP11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 ROGDIQ9GZN7 287 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms