RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 OR52N2Q8NGI0 321 aa17.13■□□□□ 0.33
HDAC6-231ENST00000488905 CAPZA3Q96KX2 299 aa17.13■□□□□ 0.33
HDAC6-231ENST00000488905 MCMBPQ9BTE3 642 aa17.13■□□□□ 0.33
HDAC6-231ENST00000488905 REXO4Q9GZR2 422 aaKnown RBP17.13■□□□□ 0.33
HDAC6-231ENST00000488905 TP63Q9H3D4 680 aaPredicted RBP17.13■□□□□ 0.33
HDAC6-231ENST00000488905 NT5DC2Q9H857 520 aa17.13■□□□□ 0.33
HDAC6-231ENST00000488905 COPS7BQ9H9Q2 264 aaPredicted RBP17.13■□□□□ 0.33
HDAC6-231ENST00000488905 MCCC2Q9HCC0 563 aa17.13■□□□□ 0.33
HDAC6-231ENST00000488905 DEPPQ9NTK1 212 aa17.13■□□□□ 0.33
HDAC6-231ENST00000488905 HPF1Q9NWY4 346 aa17.13■□□□□ 0.33
HDAC6-231ENST00000488905 NSMCE4AQ9NXX6 385 aa17.13■□□□□ 0.33
HDAC6-231ENST00000488905 MOCS1Q9NZB8 636 aa17.13■□□□□ 0.33
HDAC6-231ENST00000488905 WWOXQ9NZC7 414 aa17.13■□□□□ 0.33
HDAC6-231ENST00000488905 ERVK-11Q9UQG0 969 aa17.13■□□□□ 0.33
HDAC6-231ENST00000488905 MTORP42345 2549 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 ANKDD1BA6NHY2 528 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 TP73O15350 636 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 OR2J2O76002 312 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 LIM2P55344 173 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 PDIA2Q13087 525 aaKnown RBP17.12■□□□□ 0.33
HDAC6-231ENST00000488905 TMEM211Q6ICI0 200 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 ADNP2Q6IQ32 1131 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 CEP128Q6ZU80 1094 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 CDH24Q86UP0 819 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 TCAIMQ8N3R3 496 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 TMEM132CQ8N3T6 1108 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 ASB15Q8WXK1 588 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 SERINC2Q96SA4 455 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 CAPS2Q9BXY5 557 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 DERL2Q9GZP9 239 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 EHD1Q9H4M9 534 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 DAPP1Q9UN19 280 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 HRH3Q9Y5N1 445 aa17.12■□□□□ 0.33
HDAC6-231ENST00000488905 ARHGAP21Q5T5U3 1957 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 E7ESA3 106 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 ACOT7O00154 380 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 CYR61O00622 381 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 FANCGO15287 622 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 OR6B1O95007 311 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 WISP3O95389 354 aaPredicted RBP17.11■□□□□ 0.33
HDAC6-231ENST00000488905 IGFBP2P18065 325 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 CHRNB4P30926 498 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 SLC12A2P55011 1212 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 MTTPP55157 894 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 RCN2Q14257 317 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 ABHD17CQ6PCB6 329 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 OR14A16Q8NHC5 309 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 ASB5Q8WWX0 329 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 RASL10BQ96S79 203 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 TRIM31Q9BZY9 425 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 CNOT10Q9H9A5 744 aaKnown RBP17.11■□□□□ 0.33
HDAC6-231ENST00000488905 LIN28AQ9H9Z2 209 aaKnown RBP17.11■□□□□ 0.33
HDAC6-231ENST00000488905 DNAJC11Q9NVH1 559 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 TRMT1Q9NXH9 659 aaKnown RBP17.11■□□□□ 0.33
HDAC6-231ENST00000488905 MYOTQ9UBF9 498 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 RNF6Q9Y252 685 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 CLCA3PQ9Y6N3 262 aa17.11■□□□□ 0.33
HDAC6-231ENST00000488905 NCKAP5O14513 1909 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 A0A0G2JMM0 328 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 A0A1W2PPB8 328 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 A0A1W2PRS3 328 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 PINLYPA6NC86 204 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 FAM90A27PA6NNH2 459 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 USP27XA6NNY8 438 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 KIR3DP1A8MWS1 328 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 CLGNO14967 610 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 TAPBPO15533 448 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 PRAMEF4O60810 478 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 PDE9AO76083 593 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 IFNA16P05015 189 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 GGT5P36269 586 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 SOX3P41225 446 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 NR0B1P51843 470 aaKnown RBP17.1■□□□□ 0.33
HDAC6-231ENST00000488905 POU4F1Q01851 419 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 TFF3Q07654 80 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 ILF2Q12905 390 aaKnown RBP17.1■□□□□ 0.33
HDAC6-231ENST00000488905 BMPR2Q13873 1038 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 TESK1Q15569 626 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 FBXO48Q5FWF7 155 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 XKR6Q5GH73 641 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 EMC4Q5J8M3 183 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 PRAMEF9Q5VWM5 478 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 IL20RBQ6UXL0 311 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 HSDL2Q6YN16 418 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 RPRMLQ8N4K4 120 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 OR2M7Q8NG81 312 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 RND1Q92730 232 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 DAZLQ92904 295 aaKnown RBP17.1■□□□□ 0.33
HDAC6-231ENST00000488905 PTCD3Q96EY7 689 aaKnown RBP17.1■□□□□ 0.33
HDAC6-231ENST00000488905 ZDHHC11Q9H8X9 412 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 NPDC1Q9NQX5 325 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-231ENST00000488905 SMYD2Q9NRG4 433 aa17.1■□□□□ 0.33
HDAC6-231ENST00000488905 ZNF469Q96JG9 3925 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-231ENST00000488905 NKX2-6A6NCS4 301 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 FAM166BA8MTA8 275 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 WWP2O00308 870 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 PIAS1O75925 651 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 CD22P20273 847 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 KCNC1P48547 511 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 HSPA7P48741 367 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms