RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 DPH1Q9BZG8 443 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 AICDAQ9GZX7 198 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 TUBB1Q9H4B7 451 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 DDX31Q9H8H2 851 aaKnown RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 LRTM1Q9HBL6 345 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 MKKSQ9NPJ1 570 aaPredicted RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 PRDM7Q9NQW5 492 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 C1orf109Q9NX04 203 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 HCN3Q9P1Z3 774 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 DKK4Q9UBT3 224 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 MARCOQ9UEW3 520 aaPredicted RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 KCND3Q9UK17 655 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 ADAM29Q9UKF5 820 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 CROTQ9UKG9 612 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 FARSAQ9Y285 508 aaKnown RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 PADI2Q9Y2J8 665 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 HEATR5BQ9P2D3 2071 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 SPTBN2O15020 2390 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 SNRNP200O75643 2136 aaKnown RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 KIF26BQ2KJY2 2108 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 GNG14A0A1W2PPG7 69 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 CLDN4O14493 209 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 POLR3GO15318 223 aaPredicted RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 KLK10O43240 276 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 PEX11AO75192 247 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 RAB40ALP0C0E4 278 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 FAM58BPP0C7Q3 252 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 RNH1P13489 461 aaKnown RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 ITGAXP20702 1163 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 BSGP35613 385 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 STAT5AP42229 794 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 MAPK12P53778 367 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 OLR1P78380 273 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 MAT1AQ00266 395 aaKnown RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 TBL3Q12788 808 aaKnown RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 NCF4Q15080 339 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 TGIF1Q15583 401 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 GALNTL6Q49A17 601 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 ATP6AP1LQ52LC2 224 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 MFSD4BQ5TF39 518 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 FAM219BQ5XKK7 198 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 ZNF385CQ66K41 422 aaPredicted RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 LCN10Q6JVE6 187 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 UNQ6494/PRO21346Q6UXR6 183 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 ZNF517Q6ZMY9 492 aaPredicted RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 LRRC69Q6ZNQ3 347 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 COMMD6Q7Z4G1 85 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 ZCCHC7Q8N3Z6 543 aaKnown RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 DTWD1Q8N5C7 304 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 C1orf52Q8N6N3 182 aaKnown RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 AMER3Q8N944 861 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 ADAMTS18Q8TE60 1221 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 CT55Q8WUE5 264 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 TBC1D20Q96BZ9 403 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 MIEF2Q96C03 454 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 APIPQ96GX9 242 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 PEX11GQ96HA9 241 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 PPP1R36Q96LQ0 422 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 SORBS1Q9BX66 1292 aaKnown RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 NUF2Q9BZD4 464 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 AKIRIN1Q9H9L7 192 aaPredicted RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 GPN2Q9H9Y4 310 aaPredicted RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 WDR41Q9HAD4 459 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 LYRM4Q9HD34 91 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 SLCO1B3Q9NPD5 702 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 LYARQ9NX58 379 aaKnown RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 MS4A12Q9NXJ0 267 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 PHF11Q9UIL8 331 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 NXT1Q9UKK6 140 aaKnown RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 MRPS33Q9Y291 106 aaKnown RBP9.73□□□□□ -0.85
SKA1-204ENST00000488454 TMED5Q9Y3A6 229 aa9.73□□□□□ -0.85
SKA1-204ENST00000488454 LOC101059948A0A1B0GTJ6 334 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 ATP6AP2A0A1C7CYW4 349 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 C1QTNF9BB2RNN3 333 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 PCDH7O60245 1069 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 EEDO75530 441 aaKnown RBP9.72□□□□□ -0.85
SKA1-204ENST00000488454 ATP6AP2O75787 350 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 TGDSO95455 350 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 GBAP04062 536 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 HEXBP07686 556 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 ZGLP1P0C6A0 271 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 C1QTNF9P0C862 333 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 CPN2P22792 545 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 JAK1P23458 1154 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 PRPH2P23942 346 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 CERS1P27544 350 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 MAPK1P28482 360 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 PTPN4P29074 926 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 BUD31P41223 144 aaPredicted RBP9.72□□□□□ -0.85
SKA1-204ENST00000488454 XCR1P46094 333 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 LIM2P55344 173 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 RAB38P57729 211 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 SNRPNP63162 240 aaKnown RBP9.72□□□□□ -0.85
SKA1-204ENST00000488454 DNASE1L3Q13609 305 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 RUNX2Q13950 521 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 SYT16Q17RD7 645 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 MINDY4Q4G0A6 757 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 BROXQ5VW32 411 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 ZNF793Q6ZN11 406 aa9.72□□□□□ -0.85
SKA1-204ENST00000488454 Q6ZSR9 355 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms