RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 MSRB2Q9Y3D2 182 aa12.1□□□□□ -0.47
NELFE-209ENST00000488426 PCDHB14Q9Y5E9 798 aa12.1□□□□□ -0.47
NELFE-209ENST00000488426 SNX13Q9Y5W8 968 aa12.1□□□□□ -0.47
NELFE-209ENST00000488426 MDC1Q14676 2089 aaKnown RBP12.1□□□□□ -0.47
NELFE-209ENST00000488426 CHD6Q8TD26 2715 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 APC2O95996 2303 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 A0A0J9YY10 115 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 LILRA5A6NI73 299 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 AQP12BA6NM10 295 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 YY2O15391 372 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 ANP32DO95626 131 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 IL3P08700 152 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 ZCCHC18P0CG32 403 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 GIMD1P0DJR0 217 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 MAGP20916 626 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 STXBP1P61764 594 aaKnown RBP12.09□□□□□ -0.47
NELFE-209ENST00000488426 RHDQ02161 417 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 KLC1Q07866 573 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 TGM3Q08188 693 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 HYAL2Q12891 473 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 WLSQ5T9L3 541 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 OR4C11Q6IEV9 310 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 ARMC6Q6NXE6 501 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 FIGLAQ6QHK4 219 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 UBE3DQ7Z6J8 389 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 TRIM73Q86UV7 250 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 C17orf82Q86X59 251 aaPredicted RBP12.09□□□□□ -0.47
NELFE-209ENST00000488426 AQP12AQ8IXF9 295 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 ARL14Q8N4G2 192 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 NATD1Q8N6N6 113 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 TNIP2Q8NFZ5 429 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 OR2L5Q8NG80 312 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 NT5CQ8TCD5 201 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 MS4A6EQ96DS6 147 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 DUS3LQ96G46 650 aaKnown RBP12.09□□□□□ -0.47
NELFE-209ENST00000488426 ZNF764Q96H86 408 aaPredicted RBP12.09□□□□□ -0.47
NELFE-209ENST00000488426 KCNC2Q96PR1 638 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 ECSITQ9BQ95 431 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 SORBS1Q9BX66 1292 aaKnown RBP12.09□□□□□ -0.47
NELFE-209ENST00000488426 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.09□□□□□ -0.47
NELFE-209ENST00000488426 SH3BP4Q9P0V3 963 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 KLHL20Q9Y2M5 609 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 PCDHB3Q9Y5E6 796 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 ASXL3Q9C0F0 2248 aa12.09□□□□□ -0.47
NELFE-209ENST00000488426 A0A0A6YYD5 115 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 TCRBV3S1A0A5B6 114 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 TTC36A6NLP5 189 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 H3BNX3 289 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 TAF4O00268 1085 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 RTCAO00442 366 aaKnown RBP12.08□□□□□ -0.48
NELFE-209ENST00000488426 NOBOXO60393 691 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 PIAS2O75928 621 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 CAPNS1P04632 268 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 PROS1P07225 676 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 ANXA6P08133 673 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 HOXB3P14651 431 aaPredicted RBP12.08□□□□□ -0.48
NELFE-209ENST00000488426 CDKN2CP42773 168 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 SSR2P43308 183 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 MAZP56270 477 aaKnown RBP12.08□□□□□ -0.48
NELFE-209ENST00000488426 MRPS22P82650 360 aaKnown RBP12.08□□□□□ -0.48
NELFE-209ENST00000488426 RGS1Q08116 209 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 SELPLGQ14242 412 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 HEPACAMQ14CZ8 416 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 TOR1AIP1Q5JTV8 583 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 IRAK1BP1Q5VVH5 260 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 ANKRD26P1Q6NSI1 321 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 TRIM40Q6P9F5 258 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 OGFOD3Q6PK18 319 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 DHRS13Q6UX07 377 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 PROSER1Q86XN7 944 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 PHF12Q96QT6 1004 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 CDC6Q99741 560 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 TBCDQ9BTW9 1192 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 THUMPD3Q9BV44 507 aaKnown RBP12.08□□□□□ -0.48
NELFE-209ENST00000488426 SLC6A16Q9GZN6 736 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 AICDAQ9GZX7 198 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 MIEF1Q9NQG6 463 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 GMPR2Q9P2T1 348 aaKnown RBP12.08□□□□□ -0.48
NELFE-209ENST00000488426 MAGEL2Q9UJ55 1249 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 GMEB1Q9Y692 573 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 ANKRD11Q6UB99 2663 aaPredicted RBP12.08□□□□□ -0.48
NELFE-209ENST00000488426 LOC400499M0QZD8 3231 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 ACACAQ13085 2346 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 ARPC2O15144 300 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 SLC35G6P0C7Q6 338 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 DDCP20711 480 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 PTDSS1P48651 473 aaKnown RBP12.08□□□□□ -0.48
NELFE-209ENST00000488426 ARRB1P49407 418 aaPredicted RBP12.08□□□□□ -0.48
NELFE-209ENST00000488426 GTDC1Q4AE62 458 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 ZNF385BQ569K4 471 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 FCRL6Q6DN72 434 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 ABHD17CQ6PCB6 329 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 LRRC74BQ6ZQY2 392 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 VN1R4Q7Z5H5 301 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 ASPGQ86U10 573 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 IFNEQ86WN2 208 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 ZCCHC7Q8N3Z6 543 aaKnown RBP12.08□□□□□ -0.48
NELFE-209ENST00000488426 GOT1L1Q8NHS2 421 aaPredicted RBP12.08□□□□□ -0.48
NELFE-209ENST00000488426 GAL3ST3Q96A11 431 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 TM4SF18Q96CE8 201 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms