RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 TCF7L1Q9HCS4 588 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 CHMP1AQ9HD42 196 aaPredicted RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 C14orf105Q9NVL8 296 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 LUZP4Q9P127 313 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 SH3BGRL2Q9UJC5 107 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 MID2Q9UJV3 735 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 GABRQQ9UN88 632 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 DNMT3AQ9Y6K1 912 aaPredicted RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 KIAA1217Q5T5P2 1943 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 GLYATL1P3A0A0U1RQE8 302 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 PTGES3LE9PB15 166 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 FOXE1O00358 373 aaPredicted RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 EFSO43281 561 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 ICOSLGO75144 302 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 HPP00738 406 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 OR4E1P0C645 316 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 LINC00614P0C842 121 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 HAPLN1P10915 354 aaPredicted RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 CD72P21854 359 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 PSMB9P28065 219 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 GALNSP34059 522 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 WNT5AP41221 380 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 KCNQ1P51787 676 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 PLK1P53350 603 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 C2orf80Q0P641 193 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 UGT3A2Q3SY77 523 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 PTPN20Q4JDL3 420 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 XKR4Q5GH76 650 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 LRRC8EQ6NSJ5 796 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 NPNTQ6UXI9 565 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 DNAJC22Q8N4W6 341 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 SLC24A4Q8NFF2 622 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 OR13C3Q8NGS6 347 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 HUS1BQ8NHY5 278 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 C2CD4CQ8TF44 421 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 LPAR1Q92633 364 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 CREB3L1Q96BA8 519 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 MESP1Q9BRJ9 268 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 MRPL4Q9BYD3 311 aaKnown RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 MYOZ2Q9NPC6 264 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 PXMP2Q9NR77 195 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 TEX10Q9NXF1 929 aaPredicted RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 PPP4R1LQ9P1A2 415 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 VTI1BQ9UEU0 232 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 POMT2Q9UKY4 750 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 IQCMA0A1B0GVH7 501 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 D6RAR5 112 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 SDHDO14521 159 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 PRKYO43930 277 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 SLC22A3O75751 556 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 CTSHP09668 335 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 OR8U8P0C7N1 319 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 MST1P26927 711 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 PTGER2P43116 358 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 CRATP43155 626 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 RPL14P50914 215 aaKnown RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 SESN2P58004 480 aaPredicted RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 NFYCQ13952 458 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 DHCR24Q15392 516 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 FCN2Q15485 313 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 TBCEQ15813 527 aaPredicted RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 AVPI1Q5T686 147 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 HEATR6Q6AI08 1181 aaKnown RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 PRSS35Q8N3Z0 413 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 ZNF248Q8NDW4 579 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 NLGN2Q8NFZ4 835 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 PABPC5Q96DU9 382 aaKnown RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 FAM122AQ96E09 287 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 LRCH3Q96II8 777 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 RBCK1Q9BYM8 510 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 IL22Q9GZX6 179 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 DEFB129Q9H1M3 183 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 CCDC86Q9H6F5 360 aaKnown RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 C11orf16Q9NQ32 467 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 ZNF302Q9NR11 478 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 ERVW-1Q9UQF0 538 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 PCDHB14Q9Y5E9 798 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 ZNF646O15015 1829 aaPredicted RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 CCL15-CCL14A0A0B4J2E2 113 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 OR6C68A6NDL8 312 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 KPNA7A9QM74 516 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 HSBP1L1C9JCN9 74 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 F5H423 210 aaPredicted RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 MATN3O15232 486 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 TSPAN2O60636 221 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 RECKO95980 971 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 CSF2P04141 144 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 RPLP0P05388 317 aaKnown RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 ENGP17813 658 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 HDCP19113 662 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 AGAP20933 346 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 UBA1P22314 1058 aaKnown RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 MPSTP25325 297 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 SDC4P31431 198 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 HSD11B2P80365 405 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 ZNF252P-AS1Q0IIN9 211 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 DGCR6Q14129 220 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 LRRC32Q14392 662 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 PTPRCAPQ14761 206 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 CCL15Q16663 113 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms