RNA–Protein interactions for RNA: ENST00000488069.5

CCDC12-205, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-205ENST00000488069 TEX9Q8N6V9 391 aa16.93■□□□□ 0.3
CCDC12-205ENST00000488069 NOA1Q8NC60 698 aaKnown RBP16.93■□□□□ 0.3
CCDC12-205ENST00000488069 TMEM52Q8NDY8 209 aa16.93■□□□□ 0.3
CCDC12-205ENST00000488069 ZNF473Q8WTR7 871 aaKnown RBP16.93■□□□□ 0.3
CCDC12-205ENST00000488069 IFT81Q8WYA0 676 aa16.93■□□□□ 0.3
CCDC12-205ENST00000488069 SCMH1Q96GD3 660 aa16.93■□□□□ 0.3
CCDC12-205ENST00000488069 FMO2Q99518 471 aa16.93■□□□□ 0.3
CCDC12-205ENST00000488069 TBCDQ9BTW9 1192 aa16.93■□□□□ 0.3
CCDC12-205ENST00000488069 HES7Q9BYE0 225 aa16.93■□□□□ 0.3
CCDC12-205ENST00000488069 CDC42EP4Q9H3Q1 356 aaKnown RBP16.93■□□□□ 0.3
CCDC12-205ENST00000488069 PRDM7Q9NQW5 492 aa16.93■□□□□ 0.3
CCDC12-205ENST00000488069 LRFN1Q9P244 771 aa16.93■□□□□ 0.3
CCDC12-205ENST00000488069 SEC14L3Q9UDX4 400 aa16.93■□□□□ 0.3
CCDC12-205ENST00000488069 DMGDHQ9UI17 866 aaKnown RBP16.93■□□□□ 0.3
CCDC12-205ENST00000488069 TRBV11-1A0A0K0K1C0 115 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 CYR61O00622 381 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 FCHO1O14526 889 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 NEURL1O76050 574 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 ACSL3O95573 720 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 ALDOAP04075 364 aaKnown RBP16.92■□□□□ 0.3
CCDC12-205ENST00000488069 TUBB4AP04350 444 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 INHBAP08476 426 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 CLCN2P51788 898 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 MLF1P58340 268 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 SETDB1Q15047 1291 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 PFKFB4Q16877 469 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 UBAP2Q5T6F2 1119 aaKnown RBP16.92■□□□□ 0.3
CCDC12-205ENST00000488069 GRHL2Q6ISB3 625 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 CHSY3Q70JA7 882 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 FAM98AQ8NCA5 519 aaKnown RBP16.92■□□□□ 0.3
CCDC12-205ENST00000488069 APCDD1LQ8NCL9 501 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 OR7G3Q8NG95 312 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 CMTM7Q96FZ5 175 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 VMP1Q96GC9 406 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 CSF3RQ99062 836 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 FUT8Q9BYC5 575 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 VPS11Q9H270 941 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 LYRM4Q9HD34 91 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 ADAP2Q9NPF8 381 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 ADGRE2Q9UHX3 823 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 PPIEQ9UNP9 301 aaKnown RBP16.92■□□□□ 0.3
CCDC12-205ENST00000488069 CLDN16Q9Y5I7 305 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 IKBKGQ9Y6K9 419 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 SPACA6W5XKT8 324 aa16.92■□□□□ 0.3
CCDC12-205ENST00000488069 TGFBR3LH3BV60 316 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 SLC25A12O75746 678 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 MLYCDO95822 493 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 CLDN1O95832 211 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 TGFB1P01137 390 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 SP1P08047 785 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 PPP2R1BP30154 601 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 CYB561P49447 251 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 ALDH18A1P54886 795 aaKnown RBP16.91■□□□□ 0.3
CCDC12-205ENST00000488069 SRSF11Q05519 484 aaKnown RBP16.91■□□□□ 0.3
CCDC12-205ENST00000488069 RBPJQ06330 500 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 AP5B1Q2VPB7 878 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 GLE1Q53GS7 698 aaKnown RBP16.91■□□□□ 0.3
CCDC12-205ENST00000488069 ZNF468Q5VIY5 522 aaPredicted RBP16.91■□□□□ 0.3
CCDC12-205ENST00000488069 C1QL3Q5VWW1 255 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 SLC25A25Q6KCM7 469 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 ZNF793Q6ZN11 406 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 TAOK1Q7L7X3 1001 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 GALNTL5Q7Z4T8 443 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 UBE3DQ7Z6J8 389 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 CLNKQ7Z7G1 428 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 FJX1Q86VR8 437 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 MYLK4Q86YV6 388 aaPredicted RBP16.91■□□□□ 0.3
CCDC12-205ENST00000488069 ARMC10Q8N2F6 343 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 ACOT4Q8N9L9 421 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 SLC44A1Q8WWI5 657 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 FBXW2Q9UKT8 454 aa16.91■□□□□ 0.3
CCDC12-205ENST00000488069 CENPEQ02224 2701 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 ASPDHA6ND91 283 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 KIF2AO00139 706 aaPredicted RBP16.9■□□□□ 0.3
CCDC12-205ENST00000488069 RTCAO00442 366 aaKnown RBP16.9■□□□□ 0.3
CCDC12-205ENST00000488069 KLK8O60259 260 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 CTNSO60931 367 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 SH3BGRLO75368 114 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 IFNA16P05015 189 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 HIST1H1TP22492 207 aaPredicted RBP16.9■□□□□ 0.3
CCDC12-205ENST00000488069 ATP5A1P25705 553 aaKnown RBP16.9■□□□□ 0.3
CCDC12-205ENST00000488069 TRHRP34981 398 aaPredicted RBP16.9■□□□□ 0.3
CCDC12-205ENST00000488069 SSR2P43308 183 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 SERPINB9P50453 376 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 HLCSP50747 726 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 STX4Q12846 297 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 DDX39BQ13838 428 aaKnown RBP16.9■□□□□ 0.3
CCDC12-205ENST00000488069 ELAVL1Q15717 326 aaKnown RBP16.9■□□□□ 0.3
CCDC12-205ENST00000488069 MAPKAPK3Q16644 382 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.9■□□□□ 0.32e-10■□□□□ 11
CCDC12-205ENST00000488069 KHDRBS2Q5VWX1 349 aaKnown RBP16.9■□□□□ 0.3
CCDC12-205ENST00000488069 LIPJQ5W064 366 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 TMEM132CQ8N3T6 1108 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 THAP3Q8WTV1 239 aaPredicted RBP16.9■□□□□ 0.3
CCDC12-205ENST00000488069 NCLNQ969V3 563 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 TMEM125Q96AQ2 219 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 GPR78Q96P69 363 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 MAPKAP1Q9BPZ7 522 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 CCDC77Q9BR77 488 aa16.9■□□□□ 0.3
CCDC12-205ENST00000488069 CENPKQ9BS16 269 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms