RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 TTC23Q5W5X9 447 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 NIPAL3Q6P499 406 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 CORO6Q6QEF8 472 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 BLOC1S2Q6QNY1 142 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 PARM1Q6UWI2 310 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 LINGO4Q6UY18 593 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 CDHR3Q6ZTQ4 885 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 LHFPL4Q7Z7J7 247 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 PRUNE1Q86TP1 453 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 FAM131BQ86XD5 332 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 SLC43A2Q8N370 569 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 ZNF321PQ8N8H1 164 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 OR52K1Q8NGK4 314 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 GOLGA5Q8TBA6 731 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 U2AF1L4Q8WU68 220 aaKnown RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 RLN3Q8WXF3 142 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 PEX13Q92968 403 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 TXNDC15Q96J42 360 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 DEFB118Q96PH6 123 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 SIGLEC11Q96RL6 698 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 USP28Q96RU2 1077 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 TESK2Q96S53 571 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 MAP3K3Q99759 626 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 FAM192AQ9GZU8 254 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 SDCBP2Q9H190 292 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 CLSTN2Q9H4D0 955 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 RPAP3Q9H6T3 665 aaPredicted RBP3.27□□□□□ -1.89
HFM1-208ENST00000488023 RNF121Q9H920 327 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 FN3KRPQ9HA64 309 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 SLC52A3Q9NQ40 469 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 ELOVL5Q9NYP7 299 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 PILRAQ9UKJ1 303 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 KIAA1257Q9ULG3 409 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 ETV7Q9Y603 341 aa3.27□□□□□ -1.89
HFM1-208ENST00000488023 PDS5AQ29RF7 1337 aaKnown RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 KIF16BQ96L93 1317 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 TMEM272A0A1B0GTI8 110 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 A0A1W2PRB8 838 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 GAGE12JA6NER3 117 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 PRR32B1ATL7 298 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 ADAM10O14672 748 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 ZNF197O14709 1029 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 MLNRO43193 412 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 ECE2O60344 883 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 WDR1O75083 606 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 SOX30O94993 753 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 PAPSS2O95340 614 aaPredicted RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 PAHP00439 452 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 F7P08709 466 aaPredicted RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 FGF2P09038 288 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 POLR2MP0CAP2 368 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 CEBPBP17676 345 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 POLR2CP19387 275 aaPredicted RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 NCF2P19878 526 aaPredicted RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 FCARP24071 287 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 DPP4P27487 766 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 NR4A2P43354 598 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 CLCN4P51793 760 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 LIMK2P53671 638 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 PRMT2P55345 433 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 ATP5IP56385 69 aaPredicted RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 B3GALT5-AS1P59052 145 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 ZP1P60852 638 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 GHRHRQ02643 423 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 TRAP1Q12931 704 aaKnown RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 NFATC2Q13469 925 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 HEPACAMQ14CZ8 416 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 EXOSC7Q15024 291 aaKnown RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 P2RY14Q15391 338 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 C20orf194Q5TEA3 1177 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 PYHIN1Q6K0P9 492 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 CAPN13Q6MZZ7 669 aaPredicted RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 SLC39A4Q6P5W5 647 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 C17orf107Q6ZR85 190 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 Q6ZTK2 550 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 NANOGNBQ7Z5D8 188 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 MRPL10Q7Z7H8 261 aaKnown RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 NBPF5PQ86XG9 351 aaPredicted RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 SPATA2LQ8IUW3 424 aaPredicted RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 EGFL6Q8IUX8 553 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 ODF3L1Q8IXM7 274 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 ABTB1Q969K4 478 aaPredicted RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 HMCESQ96FZ2 354 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 DHTKD1Q96HY7 919 aaPredicted RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 VPS35Q96QK1 796 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 NPAS2Q99743 824 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 UBAC1Q9BSL1 405 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 NUSAP1Q9BXS6 441 aaKnown RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 LRRCC1Q9C099 1032 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 WWP1Q9H0M0 922 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 GANQ9H2C0 597 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 MTIF3Q9H2K0 278 aaKnown RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 DPEP2Q9H4A9 486 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 ZNF665Q9H7R5 613 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 COG4Q9H9E3 785 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 RAVER2Q9HCJ3 691 aaKnown RBP3.26□□□□□ -1.89
HFM1-208ENST00000488023 RAB18Q9NP72 206 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 CRLS1Q9UJA2 301 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 ERVK-19Q9WJR5 959 aa3.26□□□□□ -1.89
HFM1-208ENST00000488023 DLGAP4Q9Y2H0 992 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms