RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PFN3P60673 137 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 PRKCZQ05513 592 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 C2orf80Q0P641 193 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 MAP4K2Q12851 820 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 P2RY14Q15391 338 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 SPHARQ15513 63 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 Q6ZVL8 140 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 ASB18Q6ZVZ8 466 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 ELMOD2Q8IZ81 293 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 SLC38A6Q8IZM9 456 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 FCGR1BQ92637 280 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 DACT3Q96B18 629 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-211ENST00000486901 TESCQ96BS2 214 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 ARSGQ96EG1 525 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 TBC1D17Q9HA65 648 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 RIMKLBQ9ULI2 386 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 V9GYH0 126 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 A0A0G2JMP0 313 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 FAM172BPA6NC97 362 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 DVL2O14641 736 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 PLOD3O60568 738 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 BCHEP06276 602 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 KLK1P06870 262 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 MAPK1P28482 360 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 MAGEA11P43364 429 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 PIN1Q13526 163 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-211ENST00000486901 SEC23BQ15437 767 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 PRSS53Q2L4Q9 553 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 NOXA1Q86UR1 476 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 FBXO22Q8NEZ5 403 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 OR5H6Q8NGV6 325 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 SORCS1Q8WY21 1168 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 ARMC5Q96C12 935 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 COQ7Q99807 217 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 UCK2Q9BZX2 261 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 BEX1Q9HBH7 125 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 ACER3Q9NUN7 267 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 PLAGL1Q9UM63 463 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 DOCK6Q96HP0 2047 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 KCNE1BA0A087WTH5 132 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 ICMTO60725 284 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 PSMA1P25786 263 aaKnown RBP11.84□□□□□ -0.51
HSPG2-211ENST00000486901 UQCRC1P31930 480 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 KIR2DL3P43628 341 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 TAS2R50P59544 299 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 CDK6Q00534 326 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 RING1Q06587 406 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 CNTN1Q12860 1018 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 BTBD16Q32M84 506 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 MTFR2Q6P444 385 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 LHFPL3Q86UP9 236 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 VPS37AQ8NEZ2 397 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 BCL7BQ9BQE9 202 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 HDHD5Q9BXW7 423 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 SLC29A3Q9BZD2 475 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 ERVW-1Q9UQF0 538 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 TNFRSF10AO00220 468 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 EIF2S1P05198 315 aaKnown RBP11.84□□□□□ -0.51
HSPG2-211ENST00000486901 NSG1P42857 185 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 PRKAG1P54619 331 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 SRSF11Q05519 484 aaKnown RBP11.84□□□□□ -0.51
HSPG2-211ENST00000486901 TARDBPQ13148 414 aaKnown RBP eCLIP11.84□□□□□ -0.51
HSPG2-211ENST00000486901 TCEA2Q15560 299 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 CRTC2Q53ET0 693 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-211ENST00000486901 PLAG1Q6DJT9 500 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 SLC24A5Q71RS6 500 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 CHST14Q8NCH0 376 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 PHF21AQ96BD5 680 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 SCLYQ96I15 445 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 OR4K3Q96R72 315 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 WACQ9BTA9 647 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 TRPM5Q9NZQ8 1165 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 TET1Q8NFU7 2136 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 ALPK2Q86TB3 2170 aa11.84□□□□□ -0.51
HSPG2-211ENST00000486901 C2orf92A0A1B0GVN3 265 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 TBKBP1A7MCY6 615 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 TLR4O00206 839 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 SCAMP2O15127 329 aaKnown RBP11.83□□□□□ -0.52
HSPG2-211ENST00000486901 CAPN5O15484 640 aaPredicted RBP11.83□□□□□ -0.52
HSPG2-211ENST00000486901 HYAL3O43820 417 aaPredicted RBP11.83□□□□□ -0.52
HSPG2-211ENST00000486901 SYPP08247 313 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 GSTM1P09488 218 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 PEPDP12955 493 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 LIM2P55344 173 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 HSPB3Q12988 150 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 FRMPD2BQ6IN97 320 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 IL20RBQ6UXL0 311 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 CMTM8Q8IZV2 173 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 DBF4BQ8NFT6 615 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 CSGALNACT1Q8TDX6 532 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 PIK3R3Q92569 461 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 CCDC120Q96HB5 630 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 IL17FQ96PD4 163 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 EPYCQ99645 322 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 GALNT9Q9HCQ5 603 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 TMPRSS11EQ9UL52 423 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 POFUT2Q9Y2G5 429 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 CACNA1CQ13936 2221 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 A0A1W2PQ72 361 aa11.83□□□□□ -0.52
HSPG2-211ENST00000486901 ARHGEF33A8MVX0 844 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms