RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 OR4F21O95013 312 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 PDGFAP04085 211 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 SERPINA7P05543 415 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 CREB1P16220 341 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 TSPAN8P19075 237 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 CCL11P51671 97 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 NEK2P51955 445 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 NAGLUP54802 743 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 IFT88Q13099 833 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 DDX39BQ13838 428 aaKnown RBP12.37□□□□□ -0.43
SF1-216ENST00000486867 RCN2Q14257 317 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 ABRAXAS2Q15018 415 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 AP5B1Q2VPB7 878 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 MINDY4Q4G0A6 757 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 PLAG1Q6DJT9 500 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 LANCL3Q6ZV70 420 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 ZNF595Q8IYB9 648 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 TMEM52Q8NDY8 209 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 PPP4R1Q8TF05 950 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 METTL21AQ8WXB1 218 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 PSMF1Q92530 271 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 SMC6Q96SB8 1091 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 CENPKQ9BS16 269 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 TRMOQ9BU70 441 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 LHPPQ9H008 270 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 COPS7BQ9H9Q2 264 aaPredicted RBP12.37□□□□□ -0.43
SF1-216ENST00000486867 RRAGDQ9NQL2 400 aaPredicted RBP12.37□□□□□ -0.43
SF1-216ENST00000486867 ADAM29Q9UKF5 820 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 SNX6Q9UNH7 406 aa12.37□□□□□ -0.43
SF1-216ENST00000486867 NSG1A0A0A6YYJ2 146 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 TGFBR3LH3BV60 316 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 MASP2O00187 686 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 PSMD12O00232 456 aaPredicted RBP12.36□□□□□ -0.43
SF1-216ENST00000486867 RTCAO00442 366 aaKnown RBP12.36□□□□□ -0.43
SF1-216ENST00000486867 MANBAO00462 879 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 RGS16O15492 202 aaPredicted RBP12.36□□□□□ -0.43
SF1-216ENST00000486867 TRIM13O60858 407 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 PRB1P04280 392 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 PRR35P0CG20 571 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 ICAM2P13598 275 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 SSR2P43308 183 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 PGDP52209 483 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 HNRNPFP52597 415 aaKnown RBP12.36□□□□□ -0.43
SF1-216ENST00000486867 AP2B1P63010 937 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 BTG2P78543 158 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 IGLV3-21P80748 117 aaPredicted RBP12.36□□□□□ -0.43
SF1-216ENST00000486867 EEF1A2Q05639 463 aaKnown RBP12.36□□□□□ -0.43
SF1-216ENST00000486867 GALNT1Q10472 559 aaPredicted RBP12.36□□□□□ -0.43
SF1-216ENST00000486867 TERF2Q15554 542 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 NSDHLQ15738 373 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 FAAH2Q6GMR7 532 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 H3F3CQ6NXT2 135 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 JMJD6Q6NYC1 403 aaPredicted RBP12.36□□□□□ -0.43
SF1-216ENST00000486867 RNF165Q6ZSG1 346 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 EXOC3L1Q86VI1 746 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 C10orf107Q8IVU9 208 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 METTL4Q8N3J2 472 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 ARMC2Q8NEN0 867 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 TCP10LQ8TDR4 215 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 TSLPQ969D9 159 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 C11orf24Q96F05 449 aaPredicted RBP12.36□□□□□ -0.43
SF1-216ENST00000486867 FAM111AQ96PZ2 611 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 CSF3RQ99062 836 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 MAPKAP1Q9BPZ7 522 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 GATA5Q9BWX5 397 aaPredicted RBP12.36□□□□□ -0.43
SF1-216ENST00000486867 RBCK1Q9BYM8 510 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 ELOVL6Q9H5J4 265 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 NECTIN3Q9NQS3 549 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 FARSBQ9NSD9 589 aaKnown RBP12.36□□□□□ -0.43
SF1-216ENST00000486867 MS4A12Q9NXJ0 267 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 SLC17A7Q9P2U7 560 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 PPIEQ9UNP9 301 aaKnown RBP12.36□□□□□ -0.43
SF1-216ENST00000486867 MRPS33Q9Y291 106 aaKnown RBP12.36□□□□□ -0.43
SF1-216ENST00000486867 ZNF451Q9Y4E5 1061 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 ASB4Q9Y574 426 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 NBASA2RRP1 2371 aa12.36□□□□□ -0.43
SF1-216ENST00000486867 NPIPB8E9PQR5 432 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 CLDN4O14493 209 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 B4GALT2O60909 372 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 CTNSO60931 367 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 EEDO75530 441 aaKnown RBP12.35□□□□□ -0.43
SF1-216ENST00000486867 CDC123O75794 336 aaPredicted RBP12.35□□□□□ -0.43
SF1-216ENST00000486867 PDYNP01213 254 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 KRT6AP02538 564 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 KRT6BP04259 564 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 DHRS4L1P0CG22 281 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 SOX11P35716 441 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 KRT6CP48668 564 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 RAP1GDS1P52306 607 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 TBL3Q12788 808 aaKnown RBP12.35□□□□□ -0.43
SF1-216ENST00000486867 CSTF3Q12996 717 aaKnown RBP12.35□□□□□ -0.43
SF1-216ENST00000486867 EXT1Q16394 746 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 SFT2D3Q587I9 215 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 CEP85LQ5SZL2 805 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 ASB18Q6ZVZ8 466 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 KBTBD2Q8IY47 623 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 CCNYL1Q8N7R7 359 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 CDYL2Q8N8U2 506 aa12.35□□□□□ -0.43
SF1-216ENST00000486867 GBP7Q8N8V2 638 aaPredicted RBP12.35□□□□□ -0.43
SF1-216ENST00000486867 C7orf57Q8NEG2 295 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms