RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CDK3Q00526 305 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 C5orf22Q49AR2 442 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 ANKRD34AQ69YU3 496 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.66□□□□□ -0.38
HMGN1-216ENST00000486741 DPP10Q8N608 796 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 METTL27Q8N6F8 245 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-216ENST00000486741 COX18Q8N8Q8 333 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 BORCS5Q969J3 196 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 SLCO4A1Q96BD0 722 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 KAT8Q9H7Z6 458 aaKnown RBP12.66□□□□□ -0.38
HMGN1-216ENST00000486741 LTB4R2Q9NPC1 389 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 SAGE1Q9NXZ1 904 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 PCDHGA8Q9Y5G5 932 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-216ENST00000486741 CPSF4LA6NMK7 179 aaKnown RBP12.66□□□□□ -0.38
HMGN1-216ENST00000486741 MYF6P23409 242 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 NTSR1P30989 418 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 XKP51811 444 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 B4GALNT1Q00973 533 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 LARS2Q15031 903 aaKnown RBP12.66□□□□□ -0.38
HMGN1-216ENST00000486741 ZNF311Q5JNZ3 666 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 TMEM236Q5W0B7 351 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 CYHR1Q6ZMK1 362 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 MEX3DQ86XN8 651 aaKnown RBP12.66□□□□□ -0.38
HMGN1-216ENST00000486741 DMRT3Q9NQL9 472 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 CNOT11Q9UKZ1 510 aaKnown RBP12.66□□□□□ -0.38
HMGN1-216ENST00000486741 CYP8B1Q9UNU6 501 aa12.66□□□□□ -0.38
HMGN1-216ENST00000486741 MRPS7Q9Y2R9 242 aaKnown RBP12.66□□□□□ -0.38
HMGN1-216ENST00000486741 TLX2O43763 284 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-216ENST00000486741 PFKLP17858 780 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 PXNP49023 591 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-216ENST00000486741 TAP2Q03519 686 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 TBPL2Q6SJ96 375 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 Q6ZPB1 254 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-216ENST00000486741 CROCCP3Q8IVE0 287 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 ZNF548Q8NEK5 533 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-216ENST00000486741 OR9Q2Q8NGE9 314 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 HMGCLL1Q8TB92 370 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 ADAMTS19Q8TE59 1207 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 TADA1Q96BN2 335 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 RNFT2Q96EX2 444 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 ALG14Q96F25 216 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 OR2M4Q96R27 311 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 SLC38A3Q99624 504 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 N6AMT1Q9Y5N5 214 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 A8MUA0 341 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 EFCAB9A8MZ26 197 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 BTN3A3O00478 584 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 CAMK1Q14012 370 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 ZNF77Q15935 545 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 PDZK1Q5T2W1 519 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 KHDRBS2Q5VWX1 349 aaKnown RBP12.65□□□□□ -0.38
HMGN1-216ENST00000486741 PNCKQ6P2M8 343 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 TMEM107Q6UX40 140 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 DLEU7Q6UYE1 221 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 WDR53Q7Z5U6 358 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-216ENST00000486741 CARM1Q86X55 608 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 SLC5A8Q8N695 610 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 TBX5Q99593 518 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 RAB11FIP5Q9BXF6 653 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 SLC6A16Q9GZN6 736 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 ABCB9Q9NP78 766 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 HRASLS2Q9NWW9 162 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 PTGFRNQ9P2B2 879 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 PCNTO95613 3336 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 TCRBV21S2A2A0A5A6 115 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 B4GALT2O60909 372 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 MT-ND2P03891 347 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 CTSLP07711 333 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 KHKP50053 298 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 SIM1P81133 766 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-216ENST00000486741 UGT8Q16880 541 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 IQCCQ4KMZ1 466 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 ADGRD2Q7Z7M1 963 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 TMC8Q8IU68 726 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 FBXO15Q8NCQ5 510 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-216ENST00000486741 KBTBD8Q8NFY9 601 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 KCNS3Q9BQ31 491 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 OR51V1Q9H2C8 321 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 MBD1Q9UIS9 605 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-216ENST00000486741 SNX7Q9UNH6 387 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 PIAS3Q9Y6X2 628 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 CACNA1CQ13936 2221 aa12.65□□□□□ -0.38
HMGN1-216ENST00000486741 H0YAE9 185 aa12.65□□□□□ -0.39
HMGN1-216ENST00000486741 INMTO95050 263 aa12.65□□□□□ -0.39
HMGN1-216ENST00000486741 ALPPP05187 535 aa12.65□□□□□ -0.39
HMGN1-216ENST00000486741 PCSK2P16519 638 aa12.65□□□□□ -0.39
HMGN1-216ENST00000486741 ITPKBP27987 946 aa12.65□□□□□ -0.39
HMGN1-216ENST00000486741 NPRL3Q12980 569 aa12.65□□□□□ -0.39
HMGN1-216ENST00000486741 ARMCX4Q5H9R4 360 aa12.65□□□□□ -0.39
HMGN1-216ENST00000486741 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.65□□□□□ -0.39
HMGN1-216ENST00000486741 CHERPQ8IWX8 916 aaKnown RBP12.65□□□□□ -0.39
HMGN1-216ENST00000486741 TCEANCQ8N8B7 351 aa12.65□□□□□ -0.39
HMGN1-216ENST00000486741 TTLQ8NG68 377 aa12.65□□□□□ -0.39
HMGN1-216ENST00000486741 OR5D16Q8NGK9 328 aa12.65□□□□□ -0.39
HMGN1-216ENST00000486741 NEUROD4Q9HD90 331 aa12.65□□□□□ -0.39
HMGN1-216ENST00000486741 PRSS16Q9NQE7 514 aa12.65□□□□□ -0.39
HMGN1-216ENST00000486741 OR6C74A6NCV1 312 aa12.64□□□□□ -0.39
HMGN1-216ENST00000486741 RAB28P51157 221 aa12.64□□□□□ -0.39
HMGN1-216ENST00000486741 SKP1P63208 163 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms