RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 FBXW2Q9UKT8 454 aa5.34□□□□□ -1.55
COPS3-208ENST00000486032 NAALAD2Q9Y3Q0 740 aa5.34□□□□□ -1.55
COPS3-208ENST00000486032 KLK4Q9Y5K2 254 aa5.34□□□□□ -1.55
COPS3-208ENST00000486032 MYOCOSA0A1B0GUC4 107 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 A0A1B0GX78 115 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 LRIT2A6NDA9 550 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 C4orf51C9J302 202 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 SLC28A1O00337 649 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 PLPP1O14494 284 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 KLF11O14901 512 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 DSCR3O14972 297 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 FOXS1O43638 330 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 TLX3O43711 291 aaPredicted RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 RAD1O60671 282 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 DIAPH2O60879 1101 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 DNAJB6O75190 326 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 SNNO75324 88 aaPredicted RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 SEC22BO75396 215 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 CDC123O75794 336 aaPredicted RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 JUNP05412 331 aaKnown RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 KLK1P06870 262 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 KLK3P07288 261 aaPredicted RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 SERPINA6P08185 405 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 HBQ1P09105 142 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 ALOX12P18054 663 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 AGXTP21549 392 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 FBLP22087 321 aaKnown RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 PTX3P26022 381 aaPredicted RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 CERS1P27544 350 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 SERPINB1P30740 379 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 PIK3CBP42338 1070 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 FOXL2P58012 376 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 RPL38P63173 70 aaKnown RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 OCRLQ01968 901 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 PCDH1Q08174 1060 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 TGM3Q08188 693 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 GALNT1Q10472 559 aaPredicted RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 HYAL2Q12891 473 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 CSTF3Q12996 717 aaKnown RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 SRSF6Q13247 344 aaKnown RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 SLAMF1Q13291 335 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 PWP1Q13610 501 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 E2F2Q14209 437 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 ERV3-1Q14264 604 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 TGIF1Q15583 401 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 AP5B1Q2VPB7 878 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.33□□□□□ -1.56
COPS3-208ENST00000486032 DEPDC1Q5TB30 811 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 KHDRBS2Q5VWX1 349 aaKnown RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 LCN10Q6JVE6 187 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 C6orf15Q6UXA7 325 aaPredicted RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 SHISA6Q6ZSJ9 500 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 TIPARPQ7Z3E1 657 aaKnown RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 WDR75Q8IWA0 830 aaKnown RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 LRRC34Q8IZ02 419 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 SHISA5Q8N114 240 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 CACTIN-AS1Q8N1I8 211 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 C1orf52Q8N6N3 182 aaKnown RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 IL22RA1Q8N6P7 574 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 SLC38A9Q8NBW4 561 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 OR2L5Q8NG80 312 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 OR2T11Q8NH01 316 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 GAL3ST3Q96A11 431 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 RGMAQ96B86 450 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 MS4A6EQ96DS6 147 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 APIPQ96GX9 242 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 PEX11GQ96HA9 241 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 C3orf30Q96M34 536 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 SLC46A1Q96NT5 459 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 TEFMQ96QE5 360 aaKnown RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 ZPBPQ9BS86 351 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 C1orf50Q9BV19 199 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 SARGQ9BW04 601 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 DDA1Q9BW61 102 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 ASPSCR1Q9BZE9 553 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 NRSN2Q9GZP1 204 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 CHRNA10Q9GZZ6 450 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 CHST8Q9H2A9 424 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 SOX17Q9H6I2 414 aaPredicted RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 AKIRIN1Q9H9L7 192 aaPredicted RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 LRTM1Q9HBL6 345 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 ZNF304Q9HCX3 659 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 NPHS2Q9NP85 383 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 THSD1Q9NS62 852 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 FGFR1OP2Q9NVK5 253 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 RIC8BQ9NVN3 520 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 NMRK1Q9NWW6 199 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 IFT80Q9P2H3 777 aaPredicted RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 VPS29Q9UBQ0 182 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 DCTN4Q9UJW0 460 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 ANGPTL2Q9UKU9 493 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 SRPK3Q9UPE1 567 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 MSRB2Q9Y3D2 182 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 NEUROG3Q9Y4Z2 214 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 TMEM184BQ9Y519 407 aaPredicted RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 POLR3HQ9Y535 204 aaPredicted RBP5.33□□□□□ -1.56
COPS3-208ENST00000486032 PCDHGA8Q9Y5G5 932 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 DNAJC15Q9Y5T4 150 aa5.33□□□□□ -1.56
COPS3-208ENST00000486032 USH1CQ9Y6N9 552 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms