RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 TSPAN8P19075 237 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 HIST1H1TP22492 207 aaPredicted RBP11.71□□□□□ -0.53
HMG20B-211ENST00000486028 CERS1P27544 350 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 SSR2P43308 183 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 TSFMP43897 325 aaKnown RBP11.71□□□□□ -0.53
HMG20B-211ENST00000486028 NEK2P51955 445 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 ARFIP1P53367 373 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 RAB38P57729 211 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 OR4D2P58180 307 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 NAA20P61599 178 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 Q0VFX4 171 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 KLRB1Q12918 225 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 CUL3Q13618 768 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 PCOLCEQ15113 449 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 GGTA1PQ4G0N0 100 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 AGAP7PQ5VUJ5 663 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 OR4C11Q6IEV9 310 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 QSOX2Q6ZRP7 698 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 LANCL3Q6ZV70 420 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 RPS27LQ71UM5 84 aaKnown RBP11.71□□□□□ -0.53
HMG20B-211ENST00000486028 TRABD2AQ86V40 505 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 SRRM1Q8IYB3 904 aaKnown RBP11.71□□□□□ -0.53
HMG20B-211ENST00000486028 RNF175Q8N4F7 328 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 CCNYL1Q8N7R7 359 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 ACOT4Q8N9L9 421 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 MTFMTQ96DP5 389 aaKnown RBP11.71□□□□□ -0.53
HMG20B-211ENST00000486028 THOC3Q96J01 351 aaKnown RBP11.71□□□□□ -0.53
HMG20B-211ENST00000486028 IMMP1LQ96LU5 166 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 AGAP4Q96P64 663 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 TMEM237Q96Q45 408 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 SERPINI1Q99574 410 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 IQCGQ9H095 443 aaKnown RBP11.71□□□□□ -0.53
HMG20B-211ENST00000486028 ELOVL6Q9H5J4 265 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 PRDM9Q9NQV7 894 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 MID2Q9UJV3 735 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 PPT2Q9UMR5 302 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 SNX6Q9UNH7 406 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 MRPS33Q9Y291 106 aaKnown RBP11.71□□□□□ -0.53
HMG20B-211ENST00000486028 MMACHCQ9Y4U1 282 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 SPACA6W5XKT8 324 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 ZNF462Q96JM2 2506 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 PCSK5Q92824 1860 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 RTCAO00442 366 aaKnown RBP11.7□□□□□ -0.54
HMG20B-211ENST00000486028 PPP6CO00743 305 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 DPM1O60762 260 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 SEC24DO94855 1032 aaPredicted RBP11.7□□□□□ -0.54
HMG20B-211ENST00000486028 SCELO95171 688 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 PDGFAP04085 211 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 NUDT7P0C024 238 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 PRR35P0CG20 571 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 LIM2P55344 173 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 PKNOX1P55347 436 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 DNAJB13P59910 316 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 BTG2P78543 158 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 LCP2Q13094 533 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 SLAMF1Q13291 335 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 KRT71Q3SY84 523 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 SFT2D3Q587I9 215 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 SGO1Q5FBB7 561 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 CFAP157Q5JU67 520 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 BEND6Q5SZJ8 279 aaPredicted RBP11.7□□□□□ -0.54
HMG20B-211ENST00000486028 JMJD6Q6NYC1 403 aaPredicted RBP11.7□□□□□ -0.54
HMG20B-211ENST00000486028 LETMD1Q6P1Q0 360 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 RIPOR1Q6ZS17 1223 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 GPRIN3Q6ZVF9 776 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 ZNF605Q86T29 641 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 ZNF595Q8IYB9 648 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 BANPQ8N9N5 519 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 TM9SF4Q92544 642 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 TSLPQ969D9 159 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 APOPT1Q96IL0 206 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 SMC6Q96SB8 1091 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 ZNF382Q96SR6 550 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 ALG2Q9H553 416 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 ZNF552Q9H707 407 aaPredicted RBP11.7□□□□□ -0.54
HMG20B-211ENST00000486028 MKS1Q9NXB0 559 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 AHSPQ9NZD4 102 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 KCMF1Q9P0J7 381 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 TRPS1Q9UHF7 1281 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 ANAPC2Q9UJX6 822 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 DAPP1Q9UN19 280 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 PLLPQ9Y342 182 aa11.7□□□□□ -0.54
HMG20B-211ENST00000486028 IGHV3-20A0A0C4DH32 117 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 A0A1B0GTL3 188 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 BLACEA4D250 179 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 CYR61O00622 381 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 PLPP1O14494 284 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 SUV39H1O43463 412 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 OR4F21O95013 312 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 KRT6AP02538 564 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 KRT6BP04259 564 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 MAOAP21397 527 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 KRT6CP48668 564 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 NAGLUP54802 743 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 HSD17B7P56937 341 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 ZNF844Q08AG5 666 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 SLC13A2Q13183 592 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 EXT1Q16394 746 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 PLAG1Q6DJT9 500 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 ZNF793Q6ZN11 406 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms