RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 YARS2Q9Y2Z4 477 aaKnown RBP15.98■□□□□ 0.15
SMC4-216ENST00000485645 ASB1Q9Y576 335 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 CLDN16Q9Y5I7 305 aa15.98■□□□□ 0.15
SMC4-216ENST00000485645 TCRBV9S1A1TA0A576 114 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 FAM187AA6NFU0 413 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 E9PLN8 166 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 CYR61O00622 381 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 PEX1O43933 1283 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 PRAMEF4O60810 478 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 S100BP04271 92 aaPredicted RBP15.97■□□□□ 0.15
SMC4-216ENST00000485645 IFNA16P05015 189 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 TFEBP19484 476 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 CERS1P27544 350 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 PTGER1P34995 402 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 GP5P40197 560 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 SSR4P51571 173 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 GPR143P51810 404 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 LAPTM5Q13571 262 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 OR4D1Q15615 310 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 PDK4Q16654 411 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 HIST2H2ACQ16777 129 aaPredicted RBP15.97■□□□□ 0.15
SMC4-216ENST00000485645 PAGE2BQ5JRK9 111 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 PRAMEF9Q5VWM5 478 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 HIST2H2AA3Q6FI13 130 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 ADNP2Q6IQ32 1131 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 C3orf62Q6ZUJ4 267 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 CYS1Q717R9 158 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 MAATS1Q7Z4T9 603 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 MDGA2Q7Z553 956 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 CLNKQ7Z7G1 428 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 TMEM132CQ8N3T6 1108 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 PHF10Q8WUB8 498 aaKnown RBP15.97■□□□□ 0.15
SMC4-216ENST00000485645 WDR34Q96EX3 536 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 VKORC1Q9BQB6 163 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 TIMMDC1Q9NPL8 285 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 PTBP2Q9UKA9 531 aaKnown RBP15.97■□□□□ 0.15
SMC4-216ENST00000485645 RNF112Q9ULX5 631 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 CLCA3PQ9Y6N3 262 aa15.97■□□□□ 0.15
SMC4-216ENST00000485645 CACNA1CQ13936 2221 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 FAM159BA6NKW6 160 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 HS6ST1O60243 411 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 PRKNO60260 465 aaPredicted RBP15.96■□□□□ 0.15
SMC4-216ENST00000485645 CCNT2O60583 730 aaKnown RBP15.96■□□□□ 0.15
SMC4-216ENST00000485645 CTNSO60931 367 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 ELAVL4P26378 380 aaKnown RBP15.96■□□□□ 0.15
SMC4-216ENST00000485645 SPRP35270 261 aaPredicted RBP15.96■□□□□ 0.15
SMC4-216ENST00000485645 PTGS2P35354 604 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 RFC3P40938 356 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 KCNC1P48547 511 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 RAB10P61026 200 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 IRF8Q02556 426 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 BMPR2Q13873 1038 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 EFTUD2Q15029 972 aaKnown RBP eCLIP15.96■□□□□ 0.151e-5■■□□□ 12.6
SMC4-216ENST00000485645 CDSNQ15517 529 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 ELAVL1Q15717 326 aaKnown RBP15.96■□□□□ 0.15
SMC4-216ENST00000485645 C3P1Q6ZMU1 363 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 NCCRP1Q6ZVX7 275 aaPredicted RBP15.96■□□□□ 0.15
SMC4-216ENST00000485645 FGD2Q7Z6J4 655 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 CTAGE3PQ8IX95 158 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 C17orf53Q8N3J3 647 aaPredicted RBP15.96■□□□□ 0.15
SMC4-216ENST00000485645 PDPRQ8NCN5 879 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 SRFBP1Q8NEF9 429 aaKnown RBP15.96■□□□□ 0.15
SMC4-216ENST00000485645 C16orf52Q8NHV5 167 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 DAZLQ92904 295 aaKnown RBP15.96■□□□□ 0.15
SMC4-216ENST00000485645 KIAA1191Q96A73 305 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 UBXN10Q96LJ8 280 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 KCNC2Q96PR1 638 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 F2RL3Q96RI0 385 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 CSF3RQ99062 836 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 ROGDIQ9GZN7 287 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 PRM3Q9NNZ6 103 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 KCMF1Q9P0J7 381 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 ERVK-11Q9UQG0 969 aa15.96■□□□□ 0.15
SMC4-216ENST00000485645 A0A1B0GTH9 108 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 A8MVJ9 347 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 CDC40O60508 579 aaKnown RBP eCLIP15.95■□□□□ 0.14
SMC4-216ENST00000485645 GSTA2P09210 222 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 CD22P20273 847 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 GPR85P60893 370 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 ETF1P62495 437 aaKnown RBP15.95■□□□□ 0.14
SMC4-216ENST00000485645 STX4Q12846 297 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 CHIT1Q13231 466 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 ZKSCAN8Q15776 578 aaPredicted RBP15.95■□□□□ 0.14
SMC4-216ENST00000485645 TBCCQ15814 346 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 GRTP1Q5TC63 336 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 LRRC70Q7Z2Q7 622 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 GPALPP1Q8IXQ4 340 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 ZFP62Q8NB50 900 aaPredicted RBP15.95■□□□□ 0.14
SMC4-216ENST00000485645 SPATA4Q8NEY3 305 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 STAG3L4Q8TBR4 150 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 FAM57AQ8TBR7 257 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 EXT2Q93063 718 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 DMRTA2Q96SC8 542 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 ALOXE3Q9BYJ1 711 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 CD244Q9BZW8 370 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 LIN28AQ9H9Z2 209 aaKnown RBP15.95■□□□□ 0.14
SMC4-216ENST00000485645 PRDM7Q9NQW5 492 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 HPF1Q9NWY4 346 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 VTI1BQ9UEU0 232 aa15.95■□□□□ 0.14
SMC4-216ENST00000485645 PPT2Q9UMR5 302 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms