RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 ITGA10O75578 1167 aa23.95■■□□□ 1.42
HLA-F-227ENST00000485513 GSTA2P09210 222 aa23.95■■□□□ 1.42
HLA-F-227ENST00000485513 CD22P20273 847 aa23.95■■□□□ 1.42
HLA-F-227ENST00000485513 CERS1P27544 350 aa23.95■■□□□ 1.42
HLA-F-227ENST00000485513 SPRP35270 261 aaPredicted RBP23.95■■□□□ 1.42
HLA-F-227ENST00000485513 MEOX1P50221 254 aa23.95■■□□□ 1.42
HLA-F-227ENST00000485513 GPR143P51810 404 aa23.95■■□□□ 1.42
HLA-F-227ENST00000485513 LIM2P55344 173 aa23.95■■□□□ 1.42
HLA-F-227ENST00000485513 TGM3Q08188 693 aa23.95■■□□□ 1.42
HLA-F-227ENST00000485513 RCN2Q14257 317 aa23.95■■□□□ 1.42
HLA-F-227ENST00000485513 CLNKQ7Z7G1 428 aa23.95■■□□□ 1.42
HLA-F-227ENST00000485513 EXT2Q93063 718 aa23.95■■□□□ 1.42
HLA-F-227ENST00000485513 DAPP1Q9UN19 280 aa23.95■■□□□ 1.42
HLA-F-227ENST00000485513 SYNDIG1LA6NDD5 238 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 CYR61O00622 381 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 CCNT2O60583 730 aaKnown RBP23.94■■□□□ 1.42
HLA-F-227ENST00000485513 ZFAND5O76080 213 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 C1QAP02745 245 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 TFEBP19484 476 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 GPX6P59796 221 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 IRF8Q02556 426 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 C2orf54Q08AI8 447 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 LAPTM5Q13571 262 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 HIST2H2ACQ16777 129 aaPredicted RBP23.94■■□□□ 1.42
HLA-F-227ENST00000485513 PAGE2BQ5JRK9 111 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 GRTP1Q5TC63 336 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 HIST2H2AA3Q6FI13 130 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 SULF2Q8IWU5 870 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 CHERPQ8IWX8 916 aaKnown RBP23.94■■□□□ 1.42
HLA-F-227ENST00000485513 AGAP11Q8TF27 550 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 F2RL3Q96RI0 385 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 CSF3RQ99062 836 aa23.94■■□□□ 1.42
HLA-F-227ENST00000485513 TFECO14948 347 aaPredicted RBP23.93■■□□□ 1.42
HLA-F-227ENST00000485513 PEX1O43933 1283 aa23.93■■□□□ 1.42
HLA-F-227ENST00000485513 IFNA16P05015 189 aa23.93■■□□□ 1.42
HLA-F-227ENST00000485513 EPORP19235 508 aa23.93■■□□□ 1.42
HLA-F-227ENST00000485513 PTGER4P35408 488 aa23.93■■□□□ 1.42
HLA-F-227ENST00000485513 KCNC1P48547 511 aa23.93■■□□□ 1.42
HLA-F-227ENST00000485513 SSR4P51571 173 aa23.93■■□□□ 1.42
HLA-F-227ENST00000485513 CHIT1Q13231 466 aa23.93■■□□□ 1.42
HLA-F-227ENST00000485513 EFTUD2Q15029 972 aaKnown RBP eCLIP23.93■■□□□ 1.42
HLA-F-227ENST00000485513 ELAVL1Q15717 326 aaKnown RBP23.93■■□□□ 1.42
HLA-F-227ENST00000485513 LRRC70Q7Z2Q7 622 aa23.93■■□□□ 1.42
HLA-F-227ENST00000485513 TMEM132CQ8N3T6 1108 aa23.93■■□□□ 1.42
HLA-F-227ENST00000485513 KCNC2Q96PR1 638 aa23.93■■□□□ 1.42
HLA-F-227ENST00000485513 PHF12Q96QT6 1004 aa23.93■■□□□ 1.42
HLA-F-227ENST00000485513 CD244Q9BZW8 370 aa23.93■■□□□ 1.42
HLA-F-227ENST00000485513 PRDM7Q9NQW5 492 aa23.93■■□□□ 1.42
HLA-F-227ENST00000485513 YARS2Q9Y2Z4 477 aaKnown RBP23.93■■□□□ 1.42
HLA-F-227ENST00000485513 ASB1Q9Y576 335 aa23.93■■□□□ 1.42
HLA-F-227ENST00000485513 CACNA1CQ13936 2221 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 PRRG2O14669 202 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 PRKNO60260 465 aaPredicted RBP23.92■■□□□ 1.42
HLA-F-227ENST00000485513 CTNSO60931 367 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 SNRPB2P08579 225 aaKnown RBP23.92■■□□□ 1.42
HLA-F-227ENST00000485513 COX6B1P14854 86 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 PTGER1P34995 402 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 GMPRP36959 345 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 RFC3P40938 356 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 BMPR2Q13873 1038 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 TBCCQ15814 346 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 KBTBD12Q3ZCT8 623 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 RAPH1Q70E73 1250 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 MDGA2Q7Z553 956 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 DOLPP1Q86YN1 238 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 PPM1NQ8N819 430 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 SRFBP1Q8NEF9 429 aaKnown RBP23.92■■□□□ 1.42
HLA-F-227ENST00000485513 STAG3L4Q8TBR4 150 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 PHACTR1Q9C0D0 580 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 ROGDIQ9GZN7 287 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 ALG9Q9H6U8 611 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 PRM3Q9NNZ6 103 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 UTP11Q9Y3A2 253 aaKnown RBP23.92■■□□□ 1.42
HLA-F-227ENST00000485513 CLCA3PQ9Y6N3 262 aa23.92■■□□□ 1.42
HLA-F-227ENST00000485513 FAM155BO75949 473 aa23.91■■□□□ 1.42
HLA-F-227ENST00000485513 CASP2P42575 452 aa23.91■■□□□ 1.42
HLA-F-227ENST00000485513 MSH2P43246 934 aa23.91■■□□□ 1.42
HLA-F-227ENST00000485513 PLTPP55058 493 aa23.91■■□□□ 1.42
HLA-F-227ENST00000485513 CAV1Q03135 178 aa23.91■■□□□ 1.42
HLA-F-227ENST00000485513 SLMAPQ14BN4 828 aa23.91■■□□□ 1.42
HLA-F-227ENST00000485513 NCCRP1Q6ZVX7 275 aaPredicted RBP23.91■■□□□ 1.42
HLA-F-227ENST00000485513 FGD2Q7Z6J4 655 aa23.91■■□□□ 1.42
HLA-F-227ENST00000485513 CMC1Q7Z7K0 106 aa23.91■■□□□ 1.42
HLA-F-227ENST00000485513 CCDC25Q86WR0 208 aa23.91■■□□□ 1.42
HLA-F-227ENST00000485513 DAZLQ92904 295 aaKnown RBP23.91■■□□□ 1.42
HLA-F-227ENST00000485513 LYRM4Q9HD34 91 aa23.91■■□□□ 1.42
HLA-F-227ENST00000485513 TIMMDC1Q9NPL8 285 aa23.91■■□□□ 1.42
HLA-F-227ENST00000485513 NUDT4Q9NZJ9 180 aa23.91■■□□□ 1.42
HLA-F-227ENST00000485513 KCMF1Q9P0J7 381 aa23.91■■□□□ 1.42
HLA-F-227ENST00000485513 ERVK-11Q9UQG0 969 aa23.91■■□□□ 1.42
HLA-F-227ENST00000485513 MYOCOSA0A1B0GUC4 107 aa23.9■■□□□ 1.42
HLA-F-227ENST00000485513 E9PLN8 166 aa23.9■■□□□ 1.42
HLA-F-227ENST00000485513 CLDN14O95500 239 aa23.9■■□□□ 1.42
HLA-F-227ENST00000485513 SLC35E2BP0CK96 405 aa23.9■■□□□ 1.42
HLA-F-227ENST00000485513 GPR85P60893 370 aa23.9■■□□□ 1.42
HLA-F-227ENST00000485513 STX4Q12846 297 aa23.9■■□□□ 1.42
HLA-F-227ENST00000485513 C3P1Q6ZMU1 363 aa23.9■■□□□ 1.42
HLA-F-227ENST00000485513 C16orf47Q6ZP98 133 aaPredicted RBP23.9■■□□□ 1.42
HLA-F-227ENST00000485513 GDF7Q7Z4P5 450 aa23.9■■□□□ 1.42
HLA-F-227ENST00000485513 UBE3DQ7Z6J8 389 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms