RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 NSDHLQ15738 373 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 CEP85LQ5SZL2 805 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 ANKRD37Q7Z713 158 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 SCUBE1Q8IWY4 988 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 ZNF843Q8N446 348 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 CCDC63Q8NA47 563 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 C7orf57Q8NEG2 295 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 ARMC2Q8NEN0 867 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 AGAP11Q8TF27 550 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 WDR77Q9BQA1 342 aaPredicted RBP16.72■□□□□ 0.27
SREBF1-213ENST00000485080 TRMOQ9BU70 441 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 C12orf65Q9H3J6 166 aaKnown RBP16.72■□□□□ 0.27
SREBF1-213ENST00000485080 MS4A12Q9NXJ0 267 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 ADAM29Q9UKF5 820 aa16.72■□□□□ 0.27
SREBF1-213ENST00000485080 MRPS33Q9Y291 106 aaKnown RBP16.72■□□□□ 0.27
SREBF1-213ENST00000485080 SERTM1A2A2V5 107 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 OR2W5A6NFC9 320 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 RTCAO00442 366 aaKnown RBP16.71■□□□□ 0.27
SREBF1-213ENST00000485080 CLDN4O14493 209 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 TRIM13O60858 407 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 B4GALT2O60909 372 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 OR4F21O95013 312 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 KRT6AP02538 564 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 KRT6BP04259 564 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 SERPINA7P05543 415 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 CREB1P16220 341 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 SSR2P43308 183 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 KRT6CP48668 564 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 PGDP52209 483 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 RAP1GDS1P52306 607 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 Q0VFX4 171 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 ASPHQ12797 758 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 MFSD4BQ5TF39 518 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 VWA5B1Q5TIE3 1220 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 TTC19Q6DKK2 380 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-213ENST00000485080 MRM1Q6IN84 353 aaKnown RBP16.71■□□□□ 0.27
SREBF1-213ENST00000485080 JMJD6Q6NYC1 403 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-213ENST00000485080 LANCL3Q6ZV70 420 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 C10orf107Q8IVU9 208 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 HOMEZQ8IX15 550 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 CCNYL1Q8N7R7 359 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 TCP10LQ8TDR4 215 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 FAM111AQ96PZ2 611 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 NUDT9Q9BW91 350 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 RBCK1Q9BYM8 510 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 LHPPQ9H008 270 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 ZNF552Q9H707 407 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-213ENST00000485080 ZNF160Q9HCG1 818 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 RRAGDQ9NQL2 400 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-213ENST00000485080 NMRK1Q9NWW6 199 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 TP53TG5Q9Y2B4 290 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 ZNF451Q9Y4E5 1061 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 CLDN16Q9Y5I7 305 aa16.71■□□□□ 0.27
SREBF1-213ENST00000485080 RP1L1Q8IWN7 2480 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-213ENST00000485080 A0A0A6YYD5 115 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 TCRBV16S1A1N1A0A5B0 115 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 FAM227AF5H4B4 570 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 MANBAO00462 879 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 UBFD1O14562 309 aaKnown RBP16.7■□□□□ 0.26
SREBF1-213ENST00000485080 CDC123O75794 336 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-213ENST00000485080 ALPPP05187 535 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 ETV4P43268 484 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 EEF1A2Q05639 463 aaKnown RBP16.7■□□□□ 0.26
SREBF1-213ENST00000485080 CFAP157Q5JU67 520 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 PLAG1Q6DJT9 500 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 FAAH2Q6GMR7 532 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 IGFL3Q6UXB1 125 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 EXOC3L1Q86VI1 746 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 KBTBD2Q8IY47 623 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 CDYL2Q8N8U2 506 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 GBP7Q8N8V2 638 aaPredicted RBP16.7■□□□□ 0.26
SREBF1-213ENST00000485080 METTL6Q8TCB7 284 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 SELENOMQ8WWX9 145 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 TSLPQ969D9 159 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 PTCHD1Q96NR3 888 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 AHSPQ9NZD4 102 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 SLC17A7Q9P2U7 560 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 PHF11Q9UIL8 331 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 SPACA6W5XKT8 324 aa16.7■□□□□ 0.26
SREBF1-213ENST00000485080 HELZ2Q9BYK8 2649 aaKnown RBP16.7■□□□□ 0.26
SREBF1-213ENST00000485080 SPENQ96T58 3664 aaKnown RBP16.69■□□□□ 0.26
SREBF1-213ENST00000485080 NBASA2RRP1 2371 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 K7EM74 188 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 SAP18O00422 153 aaKnown RBP16.69■□□□□ 0.26
SREBF1-213ENST00000485080 CTNSO60931 367 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 SH3BGRLO75368 114 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 ULK1O75385 1050 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 SPAG7O75391 227 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 PDYNP01213 254 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 PDGFAP04085 211 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 PRR35P0CG20 571 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 ITGA3P26006 1051 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 BTG2P78543 158 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 GALNT1Q10472 559 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-213ENST00000485080 CSTF3Q12996 717 aaKnown RBP16.69■□□□□ 0.26
SREBF1-213ENST00000485080 SLAMF1Q13291 335 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 TERF2Q15554 542 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 EXT1Q16394 746 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 IGFL2Q6UWQ7 119 aa16.69■□□□□ 0.26
SREBF1-213ENST00000485080 ASB18Q6ZVZ8 466 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms