RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 MTMR12Q9C0I1 747 aa3.99□□□□□ -1.77
XPA-203ENST00000485042 OR2B2Q9GZK3 357 aa3.99□□□□□ -1.77
XPA-203ENST00000485042 TFB2MQ9H5Q4 396 aaKnown RBP3.99□□□□□ -1.77
XPA-203ENST00000485042 EVA1AQ9H8M9 152 aa3.99□□□□□ -1.77
XPA-203ENST00000485042 RPF1Q9H9Y2 349 aaKnown RBP3.99□□□□□ -1.77
XPA-203ENST00000485042 MAGEF1Q9HAY2 307 aa3.99□□□□□ -1.77
XPA-203ENST00000485042 HPF1Q9NWY4 346 aa3.99□□□□□ -1.77
XPA-203ENST00000485042 NINJ2Q9NZG7 142 aa3.99□□□□□ -1.77
XPA-203ENST00000485042 SLC12A6Q9UHW9 1150 aa3.99□□□□□ -1.77
XPA-203ENST00000485042 TRMT6Q9UJA5 497 aaKnown RBP3.99□□□□□ -1.77
XPA-203ENST00000485042 PRDM4Q9UKN5 801 aa3.99□□□□□ -1.77
XPA-203ENST00000485042 PIN4Q9Y237 131 aaKnown RBP3.99□□□□□ -1.77
XPA-203ENST00000485042 KCNK6Q9Y257 313 aa3.99□□□□□ -1.77
XPA-203ENST00000485042 ZNF510Q9Y2H8 683 aa3.99□□□□□ -1.77
XPA-203ENST00000485042 MGAMO43451 1857 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 PFASO15067 1338 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 IL16Q14005 1332 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 SH3TC1Q8TE82 1336 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 AK9Q5TCS8 1911 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 UQCRHLA0A096LP55 91 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 ANKDD1BA6NHY2 528 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 O00370 1275 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 ACSL4O60488 711 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 ATP6V1G1O75348 118 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 GAS8O95995 478 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 ALPLP05186 524 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 UQCRHP07919 91 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 IGHV4-31P0DP07 118 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 CDK4P11802 303 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 GOT1P17174 413 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 DESP17661 470 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 CA6P23280 308 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 AHCYP23526 432 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 PPP2R1AP30153 589 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 NR0B1P51843 470 aaKnown RBP3.98□□□□□ -1.77
XPA-203ENST00000485042 FKBP1BP68106 108 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 GCNT1Q02742 428 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 TRA2AQ13595 282 aaKnown RBP eCLIP3.98□□□□□ -1.77
XPA-203ENST00000485042 PDE7AQ13946 482 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 SQLEQ14534 574 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 STXBP2Q15833 593 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 IZUMO4Q1ZYL8 232 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 ZNF542PQ5EBM4 170 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 XKR3Q5GH77 459 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 CCNYL2Q5T2Q4 361 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 NADSYN1Q6IA69 706 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 ZNF770Q6IQ21 691 aaPredicted RBP3.98□□□□□ -1.77
XPA-203ENST00000485042 KLHL10Q6JEL2 608 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 PRUNE1Q86TP1 453 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 BATF2Q8N1L9 274 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 THEM5Q8N1Q8 247 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 PRSS35Q8N3Z0 413 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 MAB21L3Q8N8X9 362 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 CCNYQ8ND76 341 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 DMBX1Q8NFW5 382 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 KBTBD8Q8NFY9 601 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 OR4C15Q8NGM1 316 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 CD101Q93033 1021 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 TMEM143Q96AN5 459 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 RBM41Q96IZ5 413 aaKnown RBP3.98□□□□□ -1.77
XPA-203ENST00000485042 CFAP53Q96M91 514 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 BTBD9Q96Q07 612 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 DDX50Q9BQ39 737 aaKnown RBP3.98□□□□□ -1.77
XPA-203ENST00000485042 FAM213AQ9BRX8 229 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 ALKBH7Q9BT30 221 aaPredicted RBP3.98□□□□□ -1.77
XPA-203ENST00000485042 C1QTNF4Q9BXJ3 329 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 BICC1Q9H694 974 aaKnown RBP3.98□□□□□ -1.77
XPA-203ENST00000485042 C6orf106Q9H6K1 298 aaPredicted RBP3.98□□□□□ -1.77
XPA-203ENST00000485042 MYOZ2Q9NPC6 264 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 MRPL17Q9NRX2 175 aaKnown RBP3.98□□□□□ -1.77
XPA-203ENST00000485042 ZCCHC3Q9NUD5 404 aaKnown RBP3.98□□□□□ -1.77
XPA-203ENST00000485042 DONSONQ9NYP3 566 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 C19orf25Q9UFG5 118 aaPredicted RBP3.98□□□□□ -1.77
XPA-203ENST00000485042 DDX19BQ9UMR2 479 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 NCKAP1Q9Y2A7 1128 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 KIF3AQ9Y496 699 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 DDX49Q9Y6V7 483 aaKnown RBP3.98□□□□□ -1.77
XPA-203ENST00000485042 COLEC10Q9Y6Z7 277 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 DOCK3Q8IZD9 2030 aa3.98□□□□□ -1.77
XPA-203ENST00000485042 EYSQ5T1H1 3165 aa3.97□□□□□ -1.77
XPA-203ENST00000485042 TRBV2A0A0J9YWF9 115 aa3.97□□□□□ -1.77
XPA-203ENST00000485042 H3BMM5 538 aa3.97□□□□□ -1.77
XPA-203ENST00000485042 ATP6V0E1O15342 81 aa3.97□□□□□ -1.77
XPA-203ENST00000485042 TXNL1O43396 289 aa3.97□□□□□ -1.77
XPA-203ENST00000485042 UFL1O94874 794 aa3.97□□□□□ -1.77
XPA-203ENST00000485042 PPP1R3DO95685 299 aa3.97□□□□□ -1.77
XPA-203ENST00000485042 CAVIN2O95810 425 aa3.97□□□□□ -1.77
XPA-203ENST00000485042 UGT1A6P19224 532 aa3.97□□□□□ -1.77
XPA-203ENST00000485042 RPS12P25398 132 aaKnown RBP3.97□□□□□ -1.77
XPA-203ENST00000485042 HPDP32754 393 aaPredicted RBP3.97□□□□□ -1.77
XPA-203ENST00000485042 DUTP33316 252 aaKnown RBP3.97□□□□□ -1.77
XPA-203ENST00000485042 RABIFP47224 123 aa3.97□□□□□ -1.77
XPA-203ENST00000485042 ATXN3P54252 364 aaPredicted RBP3.97□□□□□ -1.77
XPA-203ENST00000485042 GAS1P54826 345 aa3.97□□□□□ -1.77
XPA-203ENST00000485042 POLR2FP61218 127 aaKnown RBP3.97□□□□□ -1.77
XPA-203ENST00000485042 HNRNPA0Q13151 305 aaKnown RBP3.97□□□□□ -1.77
XPA-203ENST00000485042 SYCP1Q15431 976 aa3.97□□□□□ -1.77
XPA-203ENST00000485042 ARMCX4Q5H9R4 360 aa3.97□□□□□ -1.77
XPA-203ENST00000485042 C9orf57Q5W0N0 161 aa3.97□□□□□ -1.77
XPA-203ENST00000485042 MFSD7Q6UXD7 560 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms