RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 AADACL4Q5VUY2 407 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 KBTBD6Q86V97 674 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 RNF130Q86XS8 419 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 FAM217AQ8IXS0 508 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 OR4K1Q8NGD4 311 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 ZNF296Q8WUU4 475 aaPredicted RBP14.58□□□□□ -0.08
RXRA-203ENST00000484822 SLC38A3Q99624 504 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 SCP2D1Q9UJQ7 156 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 YIPF1Q9Y548 306 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 HPRP00739 348 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 DNAJB1P25685 340 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 CASRP41180 1078 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 SPATC1Q76KD6 591 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 NUP54Q7Z3B4 507 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 ZNF227Q86WZ6 799 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 LINC00471Q8N535 108 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 DHRS1Q96LJ7 313 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 CPNE5Q9HCH3 593 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 EXOSC1Q9Y3B2 195 aaKnown RBP14.58□□□□□ -0.08
RXRA-203ENST00000484822 HTR2AP28223 471 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 HTR1EP28566 365 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 RAB5BP61020 215 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 CHRNA6Q15825 494 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 GPR33Q49SQ1 333 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 FBXO46Q6PJ61 603 aaPredicted RBP14.58□□□□□ -0.08
RXRA-203ENST00000484822 SSX6Q7RTT6 188 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 LHFPL3Q86UP9 236 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 IGFN1Q86VF2 1251 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 PRSS58Q8IYP2 241 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 RAB8BQ92930 207 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 CD180Q99467 661 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 PFDN5Q99471 154 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 PTTG1O95997 202 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 MYF6P23409 242 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 SOX2P48431 317 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 COMMD7Q86VX2 200 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 CEP97Q8IW35 865 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 IRF7Q92985 503 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 SCGB3A2Q96PL1 93 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 ABCD2Q9UBJ2 740 aa14.58□□□□□ -0.08
RXRA-203ENST00000484822 RABL2AQ9UBK7 228 aaPredicted RBP14.58□□□□□ -0.08
RXRA-203ENST00000484822 LDB2O43679 373 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 STATHP02808 62 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 MRPL3P09001 348 aaKnown RBP14.57□□□□□ -0.08
RXRA-203ENST00000484822 T-ENOLP0DO92 83 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 PVALBP20472 110 aaPredicted RBP14.57□□□□□ -0.08
RXRA-203ENST00000484822 HOXC12P31275 282 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 SPHARQ15513 63 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 NTRK2Q16620 822 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 TICAM1Q8IUC6 712 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 SAMD14Q8IZD0 417 aaPredicted RBP14.57□□□□□ -0.08
RXRA-203ENST00000484822 CELF5Q8N6W0 485 aaKnown RBP14.57□□□□□ -0.08
RXRA-203ENST00000484822 OR2AJ1Q8NGZ0 328 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 THEM6Q8WUY1 208 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 PEX13Q92968 403 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 OR51B5Q9H339 312 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 PDE4DIPQ5VU43 2346 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 SSX5O60225 188 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 H2AFB2P0C5Z0 115 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 PIM1P11309 404 aaPredicted RBP14.57□□□□□ -0.08
RXRA-203ENST00000484822 UQCRC1P31930 480 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 ARRB1P49407 418 aaPredicted RBP14.57□□□□□ -0.08
RXRA-203ENST00000484822 STC1P52823 247 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 SNTB2Q13425 540 aaKnown RBP14.57□□□□□ -0.08
RXRA-203ENST00000484822 ZNF648Q5T619 568 aaPredicted RBP14.57□□□□□ -0.08
RXRA-203ENST00000484822 FBXL22Q6P050 247 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 ZSCAN1Q8NBB4 408 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 TLR9Q9NR96 1032 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 MGAT4BQ9UQ53 548 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 ERVK-19Q9WJR5 959 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 PCDH17O14917 1159 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 ACVRL1P37023 503 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 NPRL3Q12980 569 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 OR52E8Q6IFG1 317 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 C2CD4AQ8NCU7 369 aaPredicted RBP14.57□□□□□ -0.08
RXRA-203ENST00000484822 GALNT11Q8NCW6 608 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 FCAMRQ8WWV6 532 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 HYLS1Q96M11 299 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 FCRL3Q96P31 734 aaPredicted RBP14.57□□□□□ -0.08
RXRA-203ENST00000484822 SMCO3A2RU48 225 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 ADH7P40394 386 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 ALG1LQ6GMV1 187 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 ANKRD54Q6NXT1 300 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 C17orf99Q6UX52 265 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 UBQLNLQ8IYU4 475 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 KRTCAP2Q8N6L1 136 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 HCAR2Q8TDS4 363 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 TSPEARQ8WU66 669 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 DDX1Q92499 740 aaKnown RBP14.57□□□□□ -0.08
RXRA-203ENST00000484822 PCBD2Q9H0N5 130 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 ZDHHC3Q9NYG2 299 aa14.57□□□□□ -0.08
RXRA-203ENST00000484822 NUFIP1Q9UHK0 495 aaKnown RBP14.57□□□□□ -0.08
RXRA-203ENST00000484822 B3GALT2O43825 422 aa14.56□□□□□ -0.08
RXRA-203ENST00000484822 EBLN1P0CF75 366 aa14.56□□□□□ -0.08
RXRA-203ENST00000484822 BMP8BP34820 402 aa14.56□□□□□ -0.08
RXRA-203ENST00000484822 MS4A2Q01362 244 aa14.56□□□□□ -0.08
RXRA-203ENST00000484822 COL28A1Q2UY09 1125 aa14.56□□□□□ -0.08
RXRA-203ENST00000484822 VITQ6UXI7 678 aa14.56□□□□□ -0.08
RXRA-203ENST00000484822 BMP8AQ7Z5Y6 402 aa14.56□□□□□ -0.08
RXRA-203ENST00000484822 OR8J3Q8NGG0 315 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms